Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RBM3P98179 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RBM3P98179 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBM3P98179 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBM3P98179 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC15.69■□□□□ 0.1
RBM3P98179 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RBM3P98179 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RBM3P98179 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RBM3P98179 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC15.68■□□□□ 0.1
RBM3P98179 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBM3P98179 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RBM3P98179 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RBM3P98179 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RBM3P98179 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RBM3P98179 AP004833.2-201ENST00000532228 1454 ntBASIC15.67■□□□□ 0.1
RBM3P98179 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RBM3P98179 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC15.67■□□□□ 0.1
RBM3P98179 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBM3P98179 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBM3P98179 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBM3P98179 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC15.66■□□□□ 0.1
RBM3P98179 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC15.66■□□□□ 0.1
RBM3P98179 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBM3P98179 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC15.66■□□□□ 0.1
RBM3P98179 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RBM3P98179 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC15.66■□□□□ 0.1
RBM3P98179 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBM3P98179 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RBM3P98179 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBM3P98179 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBM3P98179 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC15.65■□□□□ 0.1
RBM3P98179 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
RBM3P98179 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RBM3P98179 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC15.65■□□□□ 0.1
RBM3P98179 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC15.65■□□□□ 0.1
RBM3P98179 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RBM3P98179 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RBM3P98179 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RBM3P98179 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
RBM3P98179 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RBM3P98179 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RBM3P98179 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RBM3P98179 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RBM3P98179 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RBM3P98179 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RBM3P98179 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RBM3P98179 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RBM3P98179 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RBM3P98179 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RBM3P98179 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RBM3P98179 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RBM3P98179 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RBM3P98179 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RBM3P98179 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC15.62■□□□□ 0.09
RBM3P98179 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.61■□□□□ 0.09
RBM3P98179 THRA-202ENST00000394121 2260 ntTSL 2 BASIC15.61■□□□□ 0.09
RBM3P98179 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC15.61■□□□□ 0.09
RBM3P98179 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RBM3P98179 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RBM3P98179 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RBM3P98179 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RBM3P98179 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RBM3P98179 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC15.6■□□□□ 0.09
RBM3P98179 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBM3P98179 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.6■□□□□ 0.09
RBM3P98179 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBM3P98179 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBM3P98179 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC15.6■□□□□ 0.09
RBM3P98179 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBM3P98179 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBM3P98179 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
RBM3P98179 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBM3P98179 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBM3P98179 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RBM3P98179 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBM3P98179 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RBM3P98179 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RBM3P98179 AC010864.1-201ENST00000609407 1511 ntBASIC15.58■□□□□ 0.09
RBM3P98179 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RBM3P98179 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RBM3P98179 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.58■□□□□ 0.08
RBM3P98179 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RBM3P98179 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RBM3P98179 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RBM3P98179 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RBM3P98179 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RBM3P98179 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RBM3P98179 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RBM3P98179 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms