RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 DCAF8L2P0C7V8 631 aa31.57■■■□□ 2.64
BRPF3-202ENST00000357641 PELP1Q8IZL8 1130 aaKnown RBP31.21■■■□□ 2.59
BRPF3-202ENST00000357641 SUPT5HO00267 1087 aaKnown RBP30.85■■■□□ 2.53
BRPF3-202ENST00000357641 EHMT2Q96KQ7 1210 aa30.31■■■□□ 2.44
BRPF3-202ENST00000357641 MYT1Q01538 1121 aa30.19■■■□□ 2.42
BRPF3-202ENST00000357641 ERICH6Q7L0X2 663 aa30.17■■■□□ 2.42
BRPF3-202ENST00000357641 CENPBP07199 599 aaPredicted RBP29.97■■■□□ 2.39
BRPF3-202ENST00000357641 PCGF6Q9BYE7 350 aa29.95■■■□□ 2.38
BRPF3-202ENST00000357641 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
BRPF3-202ENST00000357641 CCER1Q8TC90 406 aaPredicted RBP29.74■■■□□ 2.35
BRPF3-202ENST00000357641 APLP2Q06481 763 aa29.49■■■□□ 2.31
BRPF3-202ENST00000357641 TTBK1Q5TCY1 1321 aaPredicted RBP29.47■■■□□ 2.31
BRPF3-202ENST00000357641 ZEB1P37275 1124 aaPredicted RBP29.43■■■□□ 2.3
BRPF3-202ENST00000357641 YTHDC1Q96MU7 727 aaKnown RBP29.31■■■□□ 2.28
BRPF3-202ENST00000357641 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
BRPF3-202ENST00000357641 NEFLP07196 543 aa29.13■■■□□ 2.25
BRPF3-202ENST00000357641 NISCHQ9Y2I1 1504 aa28.66■■■□□ 2.18
BRPF3-202ENST00000357641 HRCP23327 699 aa28.6■■■□□ 2.17
BRPF3-202ENST00000357641 RANGAP1P46060 587 aaPredicted RBP28.59■■■□□ 2.17
BRPF3-202ENST00000357641 DAXXQ9UER7 740 aaPredicted RBP28.42■■■□□ 2.14
BRPF3-202ENST00000357641 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
BRPF3-202ENST00000357641 PPARGC1BQ86YN6 1023 aaKnown RBP28.29■■■□□ 2.12
BRPF3-202ENST00000357641 TRIM26Q12899 539 aaPredicted RBP28.27■■■□□ 2.12
BRPF3-202ENST00000357641 ATP1B4Q9UN42 357 aaPredicted RBP28.21■■■□□ 2.11
BRPF3-202ENST00000357641 RTL5Q5HYW3 569 aaPredicted RBP28.12■■■□□ 2.09
BRPF3-202ENST00000357641 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
BRPF3-202ENST00000357641 ZNF316A6NFI3 1004 aaPredicted RBP27.81■■■□□ 2.04
BRPF3-202ENST00000357641 GTF3C3Q9Y5Q9 886 aa27.79■■■□□ 2.04
BRPF3-202ENST00000357641 DIEXFQ68CQ4 756 aaKnown RBP27.79■■■□□ 2.04
BRPF3-202ENST00000357641 POLR3GLQ9BT43 218 aa27.74■■■□□ 2.03
BRPF3-202ENST00000357641 CNGB1Q14028 1251 aaPredicted RBP27.65■■■□□ 2.02
BRPF3-202ENST00000357641 BCANQ96GW7 911 aa27.64■■■□□ 2.01
BRPF3-202ENST00000357641 ITGAEP38570 1179 aa27.58■■■□□ 2.01
BRPF3-202ENST00000357641 LOC105371045A0A1W2PR82 267 aa27.54■■■□□ 2
BRPF3-202ENST00000357641 HNRNPUL2Q1KMD3 747 aaKnown RBP27.53■■■□□ 2
BRPF3-202ENST00000357641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■□□□ 1.99
BRPF3-202ENST00000357641 CLSPNQ9HAW4 1339 aa27.5■■□□□ 1.99
BRPF3-202ENST00000357641 CDK11AQ9UQ88 783 aaPredicted RBP27.33■■□□□ 1.97
BRPF3-202ENST00000357641 EIF5BO60841 1220 aaKnown RBP27.24■■□□□ 1.95
BRPF3-202ENST00000357641 ACIN1Q9UKV3 1341 aaKnown RBP27.23■■□□□ 1.95
BRPF3-202ENST00000357641 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
BRPF3-202ENST00000357641 SLC4A1APQ9BWU0 796 aaKnown RBP26.93■■□□□ 1.9
BRPF3-202ENST00000357641 ANP32AP39687 249 aaKnown RBP26.92■■□□□ 1.9
BRPF3-202ENST00000357641 ANP32CO43423 234 aa26.89■■□□□ 1.89
BRPF3-202ENST00000357641 GLIPR1L2Q4G1C9 344 aa26.86■■□□□ 1.89
BRPF3-202ENST00000357641 NPM2Q86SE8 214 aaKnown RBP26.82■■□□□ 1.88
BRPF3-202ENST00000357641 MYT1LQ9UL68 1186 aa26.82■■□□□ 1.88
BRPF3-202ENST00000357641 NEUROD1Q13562 356 aa26.81■■□□□ 1.88
BRPF3-202ENST00000357641 FKBP8Q14318 412 aa26.64■■□□□ 1.86
BRPF3-202ENST00000357641 FAM50AQ14320 339 aaKnown RBP26.64■■□□□ 1.85
BRPF3-202ENST00000357641 NBR1Q14596 966 aa26.6■■□□□ 1.85
BRPF3-202ENST00000357641 ZBTB47Q9UFB7 747 aaPredicted RBP26.58■■□□□ 1.85
BRPF3-202ENST00000357641 BCL11AQ9H165 835 aa26.56■■□□□ 1.84
BRPF3-202ENST00000357641 SCAF1Q9H7N4 1312 aaKnown RBP26.55■■□□□ 1.84
BRPF3-202ENST00000357641 TRIM52Q96A61 297 aa26.55■■□□□ 1.84
BRPF3-202ENST00000357641 CANXP27824 592 aaKnown RBP26.53■■□□□ 1.84
BRPF3-202ENST00000357641 ANP32BQ92688 251 aaKnown RBP26.5■■□□□ 1.83
BRPF3-202ENST00000357641 ZNF326Q5BKZ1 582 aaKnown RBP26.42■■□□□ 1.82
BRPF3-202ENST00000357641 ARXQ96QS3 562 aa26.31■■□□□ 1.8
BRPF3-202ENST00000357641 HSP90AA1P07900 732 aaKnown RBP26.23■■□□□ 1.79
BRPF3-202ENST00000357641 ANP32EQ9BTT0 268 aa26.16■■□□□ 1.78
BRPF3-202ENST00000357641 HNRNPUQ00839 825 aaKnown RBP eCLIP26.15■■□□□ 1.78
BRPF3-202ENST00000357641 UPF2Q9HAU5 1272 aaKnown RBP26.11■■□□□ 1.77
BRPF3-202ENST00000357641 CCDC136Q96JN2 1154 aa26.05■■□□□ 1.76
BRPF3-202ENST00000357641 SLC24A1O60721 1099 aa26.05■■□□□ 1.76
BRPF3-202ENST00000357641 FAM9BQ8IZU0 186 aa26■■□□□ 1.75
BRPF3-202ENST00000357641 IRX6P78412 446 aaPredicted RBP25.97■■□□□ 1.75
BRPF3-202ENST00000357641 DDX10Q13206 875 aaKnown RBP25.96■■□□□ 1.75
BRPF3-202ENST00000357641 RTN4Q9NQC3 1192 aaKnown RBP25.92■■□□□ 1.74
BRPF3-202ENST00000357641 NEFMP07197 916 aa25.91■■□□□ 1.74
BRPF3-202ENST00000357641 MIER1Q8N108 512 aa25.88■■□□□ 1.73
BRPF3-202ENST00000357641 SALL2Q9Y467 1007 aaPredicted RBP25.87■■□□□ 1.73
BRPF3-202ENST00000357641 TRIM44Q96DX7 344 aaPredicted RBP25.8■■□□□ 1.72
BRPF3-202ENST00000357641 TNNT2P45379 298 aaPredicted RBP25.79■■□□□ 1.72
BRPF3-202ENST00000357641 NAP1L5Q96NT1 182 aaPredicted RBP25.71■■□□□ 1.71
BRPF3-202ENST00000357641 DDRGK1Q96HY6 314 aa25.7■■□□□ 1.71
BRPF3-202ENST00000357641 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.69■■□□□ 1.7
BRPF3-202ENST00000357641 TONSLQ96HA7 1378 aa25.68■■□□□ 1.7
BRPF3-202ENST00000357641 ERICH6BQ5W0A0 696 aa25.64■■□□□ 1.7
BRPF3-202ENST00000357641 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
BRPF3-202ENST00000357641 TMC1Q8TDI8 760 aa25.6■■□□□ 1.69
BRPF3-202ENST00000357641 MRS2Q9HD23 443 aa25.59■■□□□ 1.69
BRPF3-202ENST00000357641 BECN1Q14457 450 aa25.58■■□□□ 1.69
BRPF3-202ENST00000357641 LAS1LQ9Y4W2 734 aaKnown RBP25.55■■□□□ 1.68
BRPF3-202ENST00000357641 PPM1GO15355 546 aaPredicted RBP25.51■■□□□ 1.67
BRPF3-202ENST00000357641 P3H3Q8IVL6 736 aa25.51■■□□□ 1.67
BRPF3-202ENST00000357641 NOP58Q9Y2X3 529 aaKnown RBP25.48■■□□□ 1.67
BRPF3-202ENST00000357641 DNTTIP2Q5QJE6 756 aaKnown RBP25.48■■□□□ 1.67
BRPF3-202ENST00000357641 PTMAP06454 111 aaKnown RBP25.47■■□□□ 1.67
BRPF3-202ENST00000357641 NCLP19338 710 aaKnown RBP25.46■■□□□ 1.67
BRPF3-202ENST00000357641 DEKP35659 375 aaKnown RBP25.46■■□□□ 1.67
BRPF3-202ENST00000357641 ARID3CA6NKF2 412 aa25.45■■□□□ 1.66
BRPF3-202ENST00000357641 CDK11BP21127 795 aaKnown RBP25.44■■□□□ 1.66
BRPF3-202ENST00000357641 HIRIP3Q9BW71 556 aaPredicted RBP25.43■■□□□ 1.66
BRPF3-202ENST00000357641 GOLGA6L22H0YM25 854 aa25.42■■□□□ 1.66
BRPF3-202ENST00000357641 WDR43Q15061 677 aaKnown RBP eCLIP25.4■■□□□ 1.66
BRPF3-202ENST00000357641 CSRNP3Q8WYN3 585 aa25.39■■□□□ 1.65
BRPF3-202ENST00000357641 SUPT16HQ9Y5B9 1047 aaKnown RBP25.38■■□□□ 1.65
BRPF3-202ENST00000357641 AMER1Q5JTC6 1135 aaPredicted RBP25.36■■□□□ 1.65
BRPF3-202ENST00000357641 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms