RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 DCAF8L2P0C7V8 631 aa33.54■■■□□ 2.96
CTNND2-201ENST00000304623 SUPT5HO00267 1087 aaKnown RBP32.25■■■□□ 2.75
CTNND2-201ENST00000304623 PELP1Q8IZL8 1130 aaKnown RBP31.85■■■□□ 2.69
CTNND2-201ENST00000304623 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
CTNND2-201ENST00000304623 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
CTNND2-201ENST00000304623 EHMT2Q96KQ7 1210 aa31.19■■■□□ 2.58
CTNND2-201ENST00000304623 APLP2Q06481 763 aa31.02■■■□□ 2.56
CTNND2-201ENST00000304623 PCGF6Q9BYE7 350 aa30.61■■■□□ 2.49
CTNND2-201ENST00000304623 CENPBP07199 599 aaPredicted RBP30.58■■■□□ 2.49
CTNND2-201ENST00000304623 ZEB1P37275 1124 aaPredicted RBP30.48■■■□□ 2.47
CTNND2-201ENST00000304623 ERICH6Q7L0X2 663 aa30.44■■■□□ 2.46
CTNND2-201ENST00000304623 FAM9AQ8IZU1 332 aaPredicted RBP30.44■■■□□ 2.46
CTNND2-201ENST00000304623 CCER1Q8TC90 406 aaPredicted RBP30.39■■■□□ 2.46
CTNND2-201ENST00000304623 TTBK1Q5TCY1 1321 aaPredicted RBP30.27■■■□□ 2.44
CTNND2-201ENST00000304623 MYT1Q01538 1121 aa30.11■■■□□ 2.41
CTNND2-201ENST00000304623 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
CTNND2-201ENST00000304623 NEFLP07196 543 aa29.86■■■□□ 2.37
CTNND2-201ENST00000304623 RANGAP1P46060 587 aaPredicted RBP29.76■■■□□ 2.35
CTNND2-201ENST00000304623 YTHDC1Q96MU7 727 aaKnown RBP29.6■■■□□ 2.33
CTNND2-201ENST00000304623 UBTFP17480 764 aaKnown RBP29.59■■■□□ 2.33
CTNND2-201ENST00000304623 ATP1B4Q9UN42 357 aaPredicted RBP29.59■■■□□ 2.33
CTNND2-201ENST00000304623 TRIM26Q12899 539 aaPredicted RBP29.33■■■□□ 2.29
CTNND2-201ENST00000304623 HRCP23327 699 aa29.18■■■□□ 2.26
CTNND2-201ENST00000304623 PPARGC1BQ86YN6 1023 aaKnown RBP29.07■■■□□ 2.24
CTNND2-201ENST00000304623 DAXXQ9UER7 740 aaPredicted RBP29.04■■■□□ 2.24
CTNND2-201ENST00000304623 ITGAEP38570 1179 aa28.69■■■□□ 2.18
CTNND2-201ENST00000304623 POLR3GLQ9BT43 218 aa28.66■■■□□ 2.18
CTNND2-201ENST00000304623 HNRNPUL2Q1KMD3 747 aaKnown RBP28.59■■■□□ 2.17
CTNND2-201ENST00000304623 LOC105371045A0A1W2PR82 267 aa28.58■■■□□ 2.17
CTNND2-201ENST00000304623 CHIC1Q5VXU3 224 aa28.56■■■□□ 2.16
CTNND2-201ENST00000304623 RTL5Q5HYW3 569 aaPredicted RBP28.49■■■□□ 2.15
CTNND2-201ENST00000304623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.45■■■□□ 2.15
CTNND2-201ENST00000304623 DIEXFQ68CQ4 756 aaKnown RBP28.45■■■□□ 2.15
CTNND2-201ENST00000304623 MYT1LQ9UL68 1186 aa28.39■■■□□ 2.14
CTNND2-201ENST00000304623 ZNF316A6NFI3 1004 aaPredicted RBP28.34■■■□□ 2.13
CTNND2-201ENST00000304623 CNGB1Q14028 1251 aaPredicted RBP28.3■■■□□ 2.12
CTNND2-201ENST00000304623 CLSPNQ9HAW4 1339 aa28.23■■■□□ 2.11
CTNND2-201ENST00000304623 SLC4A1APQ9BWU0 796 aaKnown RBP28.04■■■□□ 2.08
CTNND2-201ENST00000304623 GTF3C3Q9Y5Q9 886 aa28■■■□□ 2.07
CTNND2-201ENST00000304623 FAM50AQ14320 339 aaKnown RBP27.95■■■□□ 2.07
CTNND2-201ENST00000304623 CDK11AQ9UQ88 783 aaPredicted RBP27.91■■■□□ 2.06
CTNND2-201ENST00000304623 BCANQ96GW7 911 aa27.88■■■□□ 2.05
CTNND2-201ENST00000304623 ANP32CO43423 234 aa27.88■■■□□ 2.05
CTNND2-201ENST00000304623 TRIM52Q96A61 297 aa27.86■■■□□ 2.05
CTNND2-201ENST00000304623 NEUROD1Q13562 356 aa27.82■■■□□ 2.04
CTNND2-201ENST00000304623 ZBTB47Q9UFB7 747 aaPredicted RBP27.64■■■□□ 2.02
CTNND2-201ENST00000304623 ACIN1Q9UKV3 1341 aaKnown RBP27.62■■■□□ 2.01
CTNND2-201ENST00000304623 ZNF326Q5BKZ1 582 aaKnown RBP27.53■■■□□ 2
CTNND2-201ENST00000304623 ANP32AP39687 249 aaKnown RBP27.48■■□□□ 1.99
CTNND2-201ENST00000304623 CANXP27824 592 aaKnown RBP27.45■■□□□ 1.98
CTNND2-201ENST00000304623 NEFMP07197 916 aa27.28■■□□□ 1.96
CTNND2-201ENST00000304623 NPM2Q86SE8 214 aaKnown RBP27.17■■□□□ 1.94
CTNND2-201ENST00000304623 CSRNP3Q8WYN3 585 aa27.13■■□□□ 1.93
CTNND2-201ENST00000304623 FKBP8Q14318 412 aa27.13■■□□□ 1.93
CTNND2-201ENST00000304623 BCL11AQ9H165 835 aa27.11■■□□□ 1.93
CTNND2-201ENST00000304623 ANP32BQ92688 251 aaKnown RBP27.1■■□□□ 1.93
CTNND2-201ENST00000304623 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
CTNND2-201ENST00000304623 SLC24A1O60721 1099 aa27.07■■□□□ 1.92
CTNND2-201ENST00000304623 EIF5BO60841 1220 aaKnown RBP27.02■■□□□ 1.92
CTNND2-201ENST00000304623 UPF2Q9HAU5 1272 aaKnown RBP26.97■■□□□ 1.91
CTNND2-201ENST00000304623 TONSLQ96HA7 1378 aa26.96■■□□□ 1.91
CTNND2-201ENST00000304623 HNRNPUQ00839 825 aaKnown RBP eCLIP26.96■■□□□ 1.91
CTNND2-201ENST00000304623 P3H3Q8IVL6 736 aa26.96■■□□□ 1.91
CTNND2-201ENST00000304623 FBLN2P98095 1184 aa26.94■■□□□ 1.9
CTNND2-201ENST00000304623 HSP90AA1P07900 732 aaKnown RBP26.93■■□□□ 1.9
CTNND2-201ENST00000304623 ABCC9O60706 1549 aa26.91■■□□□ 1.9
CTNND2-201ENST00000304623 GLIPR1L2Q4G1C9 344 aa26.88■■□□□ 1.89
CTNND2-201ENST00000304623 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
CTNND2-201ENST00000304623 ZNF777Q9ULD5 760 aaPredicted RBP26.84■■□□□ 1.89
CTNND2-201ENST00000304623 DDX10Q13206 875 aaKnown RBP26.83■■□□□ 1.89
CTNND2-201ENST00000304623 FAM9BQ8IZU0 186 aa26.82■■□□□ 1.88
CTNND2-201ENST00000304623 ARID3CA6NKF2 412 aa26.81■■□□□ 1.88
CTNND2-201ENST00000304623 CCDC136Q96JN2 1154 aa26.78■■□□□ 1.88
CTNND2-201ENST00000304623 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.74■■□□□ 1.87
CTNND2-201ENST00000304623 TMC1Q8TDI8 760 aa26.68■■□□□ 1.86
CTNND2-201ENST00000304623 NBR1Q14596 966 aa26.66■■□□□ 1.86
CTNND2-201ENST00000304623 SALL2Q9Y467 1007 aaPredicted RBP26.59■■□□□ 1.85
CTNND2-201ENST00000304623 MRS2Q9HD23 443 aa26.57■■□□□ 1.84
CTNND2-201ENST00000304623 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
CTNND2-201ENST00000304623 WDR43Q15061 677 aaKnown RBP eCLIP26.54■■□□□ 1.84
CTNND2-201ENST00000304623 CHGAP10645 457 aaKnown RBP26.52■■□□□ 1.84
CTNND2-201ENST00000304623 MIER1Q8N108 512 aa26.49■■□□□ 1.83
CTNND2-201ENST00000304623 ESF1Q9H501 851 aaKnown RBP26.48■■□□□ 1.83
CTNND2-201ENST00000304623 STAG3Q9UJ98 1225 aa26.45■■□□□ 1.83
CTNND2-201ENST00000304623 DDRGK1Q96HY6 314 aa26.42■■□□□ 1.82
CTNND2-201ENST00000304623 ARXQ96QS3 562 aa26.41■■□□□ 1.82
CTNND2-201ENST00000304623 CHIC2Q9UKJ5 165 aa26.39■■□□□ 1.82
CTNND2-201ENST00000304623 IRX6P78412 446 aaPredicted RBP26.36■■□□□ 1.81
CTNND2-201ENST00000304623 ANP32EQ9BTT0 268 aa26.35■■□□□ 1.81
CTNND2-201ENST00000304623 BECN1Q14457 450 aa26.35■■□□□ 1.81
CTNND2-201ENST00000304623 MYH16Q9H6N6 1097 aa26.33■■□□□ 1.81
CTNND2-201ENST00000304623 EIF4G2P78344 907 aaKnown RBP eCLIP26.32■■□□□ 1.8
CTNND2-201ENST00000304623 TSPY4P0CV99 314 aa26.28■■□□□ 1.8
CTNND2-201ENST00000304623 TSPY10P0CW01 314 aa26.28■■□□□ 1.8
CTNND2-201ENST00000304623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.28■■□□□ 1.8
CTNND2-201ENST00000304623 KDM2AQ9Y2K7 1162 aa26.27■■□□□ 1.8
CTNND2-201ENST00000304623 MTUS2Q5JR59 1369 aa26.25■■□□□ 1.79
CTNND2-201ENST00000304623 TRIM44Q96DX7 344 aaPredicted RBP26.24■■□□□ 1.79
CTNND2-201ENST00000304623 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
CTNND2-201ENST00000304623 GOLGA6L22H0YM25 854 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms