Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GABRR1P24046 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.28■■□□□ 1
GABRR1P24046 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
GABRR1P24046 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.28■■□□□ 1
GABRR1P24046 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABRR1P24046 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABRR1P24046 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.27■■□□□ 1
GABRR1P24046 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GABRR1P24046 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GABRR1P24046 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
GABRR1P24046 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.27■■□□□ 1
GABRR1P24046 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.27■■□□□ 1
GABRR1P24046 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.26■□□□□ 0.99
GABRR1P24046 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GABRR1P24046 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GABRR1P24046 AL449106.1-201ENST00000608517 1980 ntBASIC21.26■□□□□ 0.99
GABRR1P24046 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GABRR1P24046 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GABRR1P24046 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.25■□□□□ 0.99
GABRR1P24046 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GABRR1P24046 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.24■□□□□ 0.99
GABRR1P24046 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GABRR1P24046 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.24■□□□□ 0.99
GABRR1P24046 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GABRR1P24046 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GABRR1P24046 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
GABRR1P24046 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GABRR1P24046 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GABRR1P24046 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GABRR1P24046 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GABRR1P24046 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.23■□□□□ 0.99
GABRR1P24046 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.23■□□□□ 0.99
GABRR1P24046 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GABRR1P24046 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GABRR1P24046 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GABRR1P24046 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
GABRR1P24046 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.22■□□□□ 0.99
GABRR1P24046 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.22■□□□□ 0.99
GABRR1P24046 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
GABRR1P24046 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
GABRR1P24046 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GABRR1P24046 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GABRR1P24046 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GABRR1P24046 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GABRR1P24046 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GABRR1P24046 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GABRR1P24046 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
GABRR1P24046 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GABRR1P24046 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
GABRR1P24046 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GABRR1P24046 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GABRR1P24046 AC135731.1-201ENST00000569415 2548 ntBASIC21.19■□□□□ 0.98
GABRR1P24046 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GABRR1P24046 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.19■□□□□ 0.98
GABRR1P24046 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.19■□□□□ 0.98
GABRR1P24046 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GABRR1P24046 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GABRR1P24046 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.18■□□□□ 0.98
GABRR1P24046 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.18■□□□□ 0.98
GABRR1P24046 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.18■□□□□ 0.98
GABRR1P24046 AC091060.1-201ENST00000623524 1766 ntBASIC21.18■□□□□ 0.98
GABRR1P24046 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.17■□□□□ 0.98
GABRR1P24046 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GABRR1P24046 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GABRR1P24046 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.17■□□□□ 0.98
GABRR1P24046 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
GABRR1P24046 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.16■□□□□ 0.98
GABRR1P24046 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
GABRR1P24046 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.15■□□□□ 0.98
GABRR1P24046 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
GABRR1P24046 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.15■□□□□ 0.98
GABRR1P24046 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
GABRR1P24046 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
GABRR1P24046 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.15■□□□□ 0.98
GABRR1P24046 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GABRR1P24046 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.14■□□□□ 0.98
GABRR1P24046 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
GABRR1P24046 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GABRR1P24046 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.14■□□□□ 0.97
GABRR1P24046 AC110285.7-201ENST00000624417 1536 ntBASIC21.14■□□□□ 0.97
GABRR1P24046 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
GABRR1P24046 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GABRR1P24046 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.13■□□□□ 0.97
GABRR1P24046 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRR1P24046 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GABRR1P24046 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRR1P24046 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
GABRR1P24046 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRR1P24046 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
GABRR1P24046 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.12■□□□□ 0.97
GABRR1P24046 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
GABRR1P24046 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GABRR1P24046 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.11■□□□□ 0.97
GABRR1P24046 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GABRR1P24046 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
GABRR1P24046 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GABRR1P24046 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GABRR1P24046 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
GABRR1P24046 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GABRR1P24046 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms