Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.36■■□□□ 1.17
HIST1H1CP16403 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.36■■□□□ 1.17
HIST1H1CP16403 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
HIST1H1CP16403 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HIST1H1CP16403 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.35■■□□□ 1.17
HIST1H1CP16403 AC021231.2-201ENST00000594613 730 ntBASIC22.35■■□□□ 1.17
HIST1H1CP16403 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.35■■□□□ 1.17
HIST1H1CP16403 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H1CP16403 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.33■■□□□ 1.16
HIST1H1CP16403 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
HIST1H1CP16403 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
HIST1H1CP16403 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.32■■□□□ 1.16
HIST1H1CP16403 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.32■■□□□ 1.16
HIST1H1CP16403 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIST1H1CP16403 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
HIST1H1CP16403 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HIST1H1CP16403 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.32■■□□□ 1.16
HIST1H1CP16403 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H1CP16403 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H1CP16403 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H1CP16403 DUX4L29-201ENST00000425409 679 ntBASIC22.3■■□□□ 1.16
HIST1H1CP16403 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.3■■□□□ 1.16
HIST1H1CP16403 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H1CP16403 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H1CP16403 AP004609.3-201ENST00000610705 1884 ntBASIC22.29■■□□□ 1.16
HIST1H1CP16403 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
HIST1H1CP16403 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
HIST1H1CP16403 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
HIST1H1CP16403 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.29■■□□□ 1.16
HIST1H1CP16403 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H1CP16403 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
HIST1H1CP16403 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.27■■□□□ 1.16
HIST1H1CP16403 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H1CP16403 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H1CP16403 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.26■■□□□ 1.15
HIST1H1CP16403 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H1CP16403 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.26■■□□□ 1.15
HIST1H1CP16403 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H1CP16403 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H1CP16403 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H1CP16403 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.25■■□□□ 1.15
HIST1H1CP16403 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H1CP16403 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H1CP16403 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H1CP16403 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H1CP16403 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HIST1H1CP16403 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HIST1H1CP16403 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.24■■□□□ 1.15
HIST1H1CP16403 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HIST1H1CP16403 AC145676.1-201ENST00000514988 2004 ntBASIC22.23■■□□□ 1.15
HIST1H1CP16403 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
HIST1H1CP16403 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.23■■□□□ 1.15
HIST1H1CP16403 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.23■■□□□ 1.15
HIST1H1CP16403 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.23■■□□□ 1.15
HIST1H1CP16403 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H1CP16403 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H1CP16403 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.22■■□□□ 1.15
HIST1H1CP16403 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H1CP16403 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HIST1H1CP16403 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HIST1H1CP16403 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.21■■□□□ 1.15
HIST1H1CP16403 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.21■■□□□ 1.15
HIST1H1CP16403 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.21■■□□□ 1.15
HIST1H1CP16403 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.21■■□□□ 1.15
HIST1H1CP16403 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HIST1H1CP16403 WHAMMP3-201ENST00000611636 1609 ntBASIC22.2■■□□□ 1.15
HIST1H1CP16403 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.15
HIST1H1CP16403 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HIST1H1CP16403 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HIST1H1CP16403 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.2■■□□□ 1.14
HIST1H1CP16403 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST1H1CP16403 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.19■■□□□ 1.14
HIST1H1CP16403 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HIST1H1CP16403 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HIST1H1CP16403 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HIST1H1CP16403 AC142472.1-201ENST00000612013 1741 ntBASIC22.17■■□□□ 1.14
HIST1H1CP16403 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.17■■□□□ 1.14
HIST1H1CP16403 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HIST1H1CP16403 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HIST1H1CP16403 AC092803.2-201ENST00000564287 1899 ntBASIC22.16■■□□□ 1.14
HIST1H1CP16403 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
HIST1H1CP16403 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.16■■□□□ 1.14
HIST1H1CP16403 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HIST1H1CP16403 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HIST1H1CP16403 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HIST1H1CP16403 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
HIST1H1CP16403 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
HIST1H1CP16403 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
HIST1H1CP16403 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HIST1H1CP16403 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.14■■□□□ 1.13
HIST1H1CP16403 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.14■■□□□ 1.13
HIST1H1CP16403 RPS2P35-201ENST00000443417 897 ntBASIC22.13■■□□□ 1.13
HIST1H1CP16403 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HIST1H1CP16403 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HIST1H1CP16403 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HIST1H1CP16403 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.13■■□□□ 1.13
HIST1H1CP16403 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
HIST1H1CP16403 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HIST1H1CP16403 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HIST1H1CP16403 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 1647 ms