Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CCNYL3P0C7X3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCNYL3P0C7X3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CCNYL3P0C7X3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.93■■□□□ 1.42
CCNYL3P0C7X3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCNYL3P0C7X3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCNYL3P0C7X3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCNYL3P0C7X3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.92■■□□□ 1.42
CCNYL3P0C7X3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCNYL3P0C7X3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNYL3P0C7X3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CCNYL3P0C7X3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNYL3P0C7X3 AC012354.3-201ENST00000623734 483 ntBASIC23.91■■□□□ 1.42
CCNYL3P0C7X3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CCNYL3P0C7X3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.9■■□□□ 1.42
CCNYL3P0C7X3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CCNYL3P0C7X3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.89■■□□□ 1.42
CCNYL3P0C7X3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCNYL3P0C7X3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCNYL3P0C7X3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.89■■□□□ 1.41
CCNYL3P0C7X3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCNYL3P0C7X3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.89■■□□□ 1.41
CCNYL3P0C7X3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCNYL3P0C7X3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNYL3P0C7X3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCNYL3P0C7X3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNYL3P0C7X3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
CCNYL3P0C7X3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.87■■□□□ 1.41
CCNYL3P0C7X3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCNYL3P0C7X3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.87■■□□□ 1.41
CCNYL3P0C7X3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCNYL3P0C7X3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.87■■□□□ 1.41
CCNYL3P0C7X3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCNYL3P0C7X3 ECEL1P2-201ENST00000461596 1295 ntBASIC23.86■■□□□ 1.41
CCNYL3P0C7X3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.86■■□□□ 1.41
CCNYL3P0C7X3 AC092296.2-201ENST00000589470 999 ntBASIC23.86■■□□□ 1.41
CCNYL3P0C7X3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCNYL3P0C7X3 DRD5P2-201ENST00000421395 2012 ntBASIC23.86■■□□□ 1.41
CCNYL3P0C7X3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.85■■□□□ 1.41
CCNYL3P0C7X3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCNYL3P0C7X3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.83■■□□□ 1.41
CCNYL3P0C7X3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCNYL3P0C7X3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
CCNYL3P0C7X3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCNYL3P0C7X3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCNYL3P0C7X3 AC100797.4-201ENST00000631653 1827 ntBASIC23.81■■□□□ 1.4
CCNYL3P0C7X3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNYL3P0C7X3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNYL3P0C7X3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCNYL3P0C7X3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNYL3P0C7X3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.8■■□□□ 1.4
CCNYL3P0C7X3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNYL3P0C7X3 U85056.1-201ENST00000616429 682 ntBASIC23.8■■□□□ 1.4
CCNYL3P0C7X3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNYL3P0C7X3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNYL3P0C7X3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCNYL3P0C7X3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CCNYL3P0C7X3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCNYL3P0C7X3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CCNYL3P0C7X3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.79■■□□□ 1.4
CCNYL3P0C7X3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCNYL3P0C7X3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.78■■□□□ 1.4
CCNYL3P0C7X3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CCNYL3P0C7X3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNYL3P0C7X3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCNYL3P0C7X3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.78■■□□□ 1.4
CCNYL3P0C7X3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCNYL3P0C7X3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCNYL3P0C7X3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCNYL3P0C7X3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCNYL3P0C7X3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.77■■□□□ 1.4
CCNYL3P0C7X3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNYL3P0C7X3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNYL3P0C7X3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNYL3P0C7X3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNYL3P0C7X3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNYL3P0C7X3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNYL3P0C7X3 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.76■■□□□ 1.39
CCNYL3P0C7X3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNYL3P0C7X3 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.76■■□□□ 1.39
CCNYL3P0C7X3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNYL3P0C7X3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNYL3P0C7X3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCNYL3P0C7X3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNYL3P0C7X3 AL033527.3-201ENST00000566366 1196 ntBASIC23.75■■□□□ 1.39
CCNYL3P0C7X3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CCNYL3P0C7X3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCNYL3P0C7X3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNYL3P0C7X3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNYL3P0C7X3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNYL3P0C7X3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNYL3P0C7X3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNYL3P0C7X3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNYL3P0C7X3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
CCNYL3P0C7X3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNYL3P0C7X3 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.73■■□□□ 1.39
CCNYL3P0C7X3 AC018358.1-201ENST00000631079 1402 ntBASIC23.73■■□□□ 1.39
CCNYL3P0C7X3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCNYL3P0C7X3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCNYL3P0C7X3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms