Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.57■■□□□ 1.68
MT-CO1P00395 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.57■■□□□ 1.68
MT-CO1P00395 AC022413.1-201ENST00000624602 984 ntBASIC25.57■■□□□ 1.68
MT-CO1P00395 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.56■■□□□ 1.68
MT-CO1P00395 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
MT-CO1P00395 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
MT-CO1P00395 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.56■■□□□ 1.68
MT-CO1P00395 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
MT-CO1P00395 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.55■■□□□ 1.68
MT-CO1P00395 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
MT-CO1P00395 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.55■■□□□ 1.68
MT-CO1P00395 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.55■■□□□ 1.68
MT-CO1P00395 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MT-CO1P00395 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.55■■□□□ 1.68
MT-CO1P00395 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
MT-CO1P00395 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
MT-CO1P00395 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.54■■□□□ 1.68
MT-CO1P00395 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
MT-CO1P00395 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
MT-CO1P00395 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
MT-CO1P00395 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
MT-CO1P00395 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
MT-CO1P00395 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MT-CO1P00395 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
MT-CO1P00395 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
MT-CO1P00395 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MT-CO1P00395 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
MT-CO1P00395 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.51■■□□□ 1.67
MT-CO1P00395 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
MT-CO1P00395 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
MT-CO1P00395 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
MT-CO1P00395 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.5■■□□□ 1.67
MT-CO1P00395 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
MT-CO1P00395 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
MT-CO1P00395 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.5■■□□□ 1.67
MT-CO1P00395 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.5■■□□□ 1.67
MT-CO1P00395 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.5■■□□□ 1.67
MT-CO1P00395 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.5■■□□□ 1.67
MT-CO1P00395 AC060814.1-201ENST00000554326 538 ntBASIC25.5■■□□□ 1.67
MT-CO1P00395 AC018358.1-201ENST00000631079 1402 ntBASIC25.5■■□□□ 1.67
MT-CO1P00395 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
MT-CO1P00395 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MT-CO1P00395 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.49■■□□□ 1.67
MT-CO1P00395 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MT-CO1P00395 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
MT-CO1P00395 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
MT-CO1P00395 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.48■■□□□ 1.67
MT-CO1P00395 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.48■■□□□ 1.67
MT-CO1P00395 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
MT-CO1P00395 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.47■■□□□ 1.67
MT-CO1P00395 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.47■■□□□ 1.67
MT-CO1P00395 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MT-CO1P00395 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MT-CO1P00395 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
MT-CO1P00395 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
MT-CO1P00395 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MT-CO1P00395 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.46■■□□□ 1.67
MT-CO1P00395 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MT-CO1P00395 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
MT-CO1P00395 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
MT-CO1P00395 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
MT-CO1P00395 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
MT-CO1P00395 RNF126P1-201ENST00000567452 1320 ntBASIC25.45■■□□□ 1.66
MT-CO1P00395 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
MT-CO1P00395 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.45■■□□□ 1.66
MT-CO1P00395 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
MT-CO1P00395 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
MT-CO1P00395 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
MT-CO1P00395 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MT-CO1P00395 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.44■■□□□ 1.66
MT-CO1P00395 RARRES2P2-201ENST00000394842 485 ntBASIC25.43■■□□□ 1.66
MT-CO1P00395 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
MT-CO1P00395 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
MT-CO1P00395 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.42■■□□□ 1.66
MT-CO1P00395 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
MT-CO1P00395 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
MT-CO1P00395 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
MT-CO1P00395 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
MT-CO1P00395 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
MT-CO1P00395 AL359258.2-201ENST00000564063 1566 ntBASIC25.4■■□□□ 1.66
MT-CO1P00395 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
MT-CO1P00395 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
MT-CO1P00395 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
MT-CO1P00395 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
MT-CO1P00395 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.39■■□□□ 1.66
MT-CO1P00395 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
MT-CO1P00395 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
MT-CO1P00395 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MT-CO1P00395 AC126177.7-201ENST00000547904 679 ntBASIC25.38■■□□□ 1.65
MT-CO1P00395 AC092296.2-201ENST00000589470 999 ntBASIC25.38■■□□□ 1.65
MT-CO1P00395 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MT-CO1P00395 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
MT-CO1P00395 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MT-CO1P00395 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
MT-CO1P00395 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
MT-CO1P00395 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MT-CO1P00395 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MT-CO1P00395 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.36■■□□□ 1.65
MT-CO1P00395 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MT-CO1P00395 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms