Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SUPT3HO75486 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SUPT3HO75486 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
SUPT3HO75486 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.5■■□□□ 1.51
SUPT3HO75486 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SUPT3HO75486 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SUPT3HO75486 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.5■■□□□ 1.51
SUPT3HO75486 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.5■■□□□ 1.51
SUPT3HO75486 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SUPT3HO75486 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SUPT3HO75486 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SUPT3HO75486 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.5■■□□□ 1.51
SUPT3HO75486 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.49■■□□□ 1.51
SUPT3HO75486 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SUPT3HO75486 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
SUPT3HO75486 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SUPT3HO75486 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SUPT3HO75486 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
SUPT3HO75486 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SUPT3HO75486 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.47■■□□□ 1.51
SUPT3HO75486 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SUPT3HO75486 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SUPT3HO75486 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.46■■□□□ 1.51
SUPT3HO75486 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SUPT3HO75486 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
SUPT3HO75486 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.45■■□□□ 1.51
SUPT3HO75486 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.45■■□□□ 1.5
SUPT3HO75486 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.45■■□□□ 1.5
SUPT3HO75486 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.45■■□□□ 1.5
SUPT3HO75486 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SUPT3HO75486 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.44■■□□□ 1.5
SUPT3HO75486 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SUPT3HO75486 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SUPT3HO75486 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
SUPT3HO75486 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.44■■□□□ 1.5
SUPT3HO75486 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SUPT3HO75486 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.43■■□□□ 1.5
SUPT3HO75486 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.43■■□□□ 1.5
SUPT3HO75486 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
SUPT3HO75486 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
SUPT3HO75486 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.42■■□□□ 1.5
SUPT3HO75486 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
SUPT3HO75486 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SUPT3HO75486 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.42■■□□□ 1.5
SUPT3HO75486 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SUPT3HO75486 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.42■■□□□ 1.5
SUPT3HO75486 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.41■■□□□ 1.5
SUPT3HO75486 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SUPT3HO75486 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SUPT3HO75486 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SUPT3HO75486 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SUPT3HO75486 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SUPT3HO75486 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SUPT3HO75486 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SUPT3HO75486 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.4■■□□□ 1.5
SUPT3HO75486 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SUPT3HO75486 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SUPT3HO75486 AL449106.1-201ENST00000608517 1980 ntBASIC24.4■■□□□ 1.5
SUPT3HO75486 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SUPT3HO75486 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SUPT3HO75486 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SUPT3HO75486 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SUPT3HO75486 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.39■■□□□ 1.49
SUPT3HO75486 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SUPT3HO75486 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SUPT3HO75486 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SUPT3HO75486 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SUPT3HO75486 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.38■■□□□ 1.49
SUPT3HO75486 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.38■■□□□ 1.49
SUPT3HO75486 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SUPT3HO75486 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.38■■□□□ 1.49
SUPT3HO75486 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SUPT3HO75486 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.37■■□□□ 1.49
SUPT3HO75486 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
SUPT3HO75486 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SUPT3HO75486 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.37■■□□□ 1.49
SUPT3HO75486 LINC01971-201ENST00000617888 1048 ntBASIC24.36■■□□□ 1.49
SUPT3HO75486 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SUPT3HO75486 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SUPT3HO75486 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.35■■□□□ 1.49
SUPT3HO75486 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SUPT3HO75486 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.35■■□□□ 1.49
SUPT3HO75486 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SUPT3HO75486 AP004609.3-201ENST00000610705 1884 ntBASIC24.34■■□□□ 1.49
SUPT3HO75486 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
SUPT3HO75486 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SUPT3HO75486 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SUPT3HO75486 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.34■■□□□ 1.49
SUPT3HO75486 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SUPT3HO75486 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SUPT3HO75486 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.34■■□□□ 1.49
SUPT3HO75486 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SUPT3HO75486 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SUPT3HO75486 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.33■■□□□ 1.49
SUPT3HO75486 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SUPT3HO75486 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SUPT3HO75486 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SUPT3HO75486 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.32■■□□□ 1.48
SUPT3HO75486 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.31■■□□□ 1.48
SUPT3HO75486 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms