Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.83■■□□□ 1.41
CPNE3O75131 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CPNE3O75131 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.82■■□□□ 1.4
CPNE3O75131 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE3O75131 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.81■■□□□ 1.4
CPNE3O75131 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPNE3O75131 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPNE3O75131 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPNE3O75131 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.8■■□□□ 1.4
CPNE3O75131 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CPNE3O75131 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.8■■□□□ 1.4
CPNE3O75131 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CPNE3O75131 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPNE3O75131 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.79■■□□□ 1.4
CPNE3O75131 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPNE3O75131 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE3O75131 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE3O75131 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE3O75131 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.78■■□□□ 1.4
CPNE3O75131 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CPNE3O75131 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE3O75131 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.77■■□□□ 1.4
CPNE3O75131 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CPNE3O75131 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPNE3O75131 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPNE3O75131 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPNE3O75131 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.76■■□□□ 1.39
CPNE3O75131 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.76■■□□□ 1.39
CPNE3O75131 AC012354.3-201ENST00000623734 483 ntBASIC23.76■■□□□ 1.39
CPNE3O75131 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPNE3O75131 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.76■■□□□ 1.39
CPNE3O75131 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CPNE3O75131 AP002414.2-202ENST00000590929 1450 ntBASIC23.75■■□□□ 1.39
CPNE3O75131 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.75■■□□□ 1.39
CPNE3O75131 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.75■■□□□ 1.39
CPNE3O75131 AL157400.5-201ENST00000507624 621 ntBASIC23.75■■□□□ 1.39
CPNE3O75131 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CPNE3O75131 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.74■■□□□ 1.39
CPNE3O75131 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE3O75131 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE3O75131 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.74■■□□□ 1.39
CPNE3O75131 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.74■■□□□ 1.39
CPNE3O75131 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE3O75131 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CPNE3O75131 U85056.1-201ENST00000616429 682 ntBASIC23.73■■□□□ 1.39
CPNE3O75131 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE3O75131 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.73■■□□□ 1.39
CPNE3O75131 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE3O75131 AL359258.2-201ENST00000564063 1566 ntBASIC23.73■■□□□ 1.39
CPNE3O75131 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE3O75131 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CPNE3O75131 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CPNE3O75131 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
CPNE3O75131 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.72■■□□□ 1.39
CPNE3O75131 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPNE3O75131 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.71■■□□□ 1.39
CPNE3O75131 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.71■■□□□ 1.39
CPNE3O75131 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CPNE3O75131 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CPNE3O75131 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPNE3O75131 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CPNE3O75131 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
CPNE3O75131 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CPNE3O75131 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CPNE3O75131 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CPNE3O75131 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.7■■□□□ 1.38
CPNE3O75131 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPNE3O75131 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPNE3O75131 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CPNE3O75131 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CPNE3O75131 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPNE3O75131 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPNE3O75131 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.68■■□□□ 1.38
CPNE3O75131 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPNE3O75131 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPNE3O75131 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPNE3O75131 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CPNE3O75131 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CPNE3O75131 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CPNE3O75131 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPNE3O75131 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPNE3O75131 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.66■■□□□ 1.38
CPNE3O75131 AC007029.1-201ENST00000604183 313 ntBASIC23.66■■□□□ 1.38
CPNE3O75131 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPNE3O75131 AC018358.1-201ENST00000631079 1402 ntBASIC23.66■■□□□ 1.38
CPNE3O75131 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPNE3O75131 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPNE3O75131 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.65■■□□□ 1.38
CPNE3O75131 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CPNE3O75131 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPNE3O75131 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CPNE3O75131 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CPNE3O75131 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CPNE3O75131 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CPNE3O75131 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
CPNE3O75131 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CPNE3O75131 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPNE3O75131 AC135731.1-201ENST00000569415 2548 ntBASIC23.63■■□□□ 1.37
CPNE3O75131 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPNE3O75131 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms