Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PNMA6EA0A0J9YXQ4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PNMA6EA0A0J9YXQ4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PNMA6EA0A0J9YXQ4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.2■■■□□ 2.59
PNMA6EA0A0J9YXQ4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PNMA6EA0A0J9YXQ4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PNMA6EA0A0J9YXQ4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
PNMA6EA0A0J9YXQ4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
PNMA6EA0A0J9YXQ4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
PNMA6EA0A0J9YXQ4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.19■■■□□ 2.58
PNMA6EA0A0J9YXQ4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
PNMA6EA0A0J9YXQ4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
PNMA6EA0A0J9YXQ4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
PNMA6EA0A0J9YXQ4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
PNMA6EA0A0J9YXQ4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
PNMA6EA0A0J9YXQ4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
PNMA6EA0A0J9YXQ4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.18■■■□□ 2.58
PNMA6EA0A0J9YXQ4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.18■■■□□ 2.58
PNMA6EA0A0J9YXQ4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PNMA6EA0A0J9YXQ4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.17■■■□□ 2.58
PNMA6EA0A0J9YXQ4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PNMA6EA0A0J9YXQ4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
PNMA6EA0A0J9YXQ4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PNMA6EA0A0J9YXQ4 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.16■■■□□ 2.58
PNMA6EA0A0J9YXQ4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PNMA6EA0A0J9YXQ4 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.16■■■□□ 2.58
PNMA6EA0A0J9YXQ4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PNMA6EA0A0J9YXQ4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PNMA6EA0A0J9YXQ4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.15■■■□□ 2.58
PNMA6EA0A0J9YXQ4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PNMA6EA0A0J9YXQ4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.15■■■□□ 2.58
PNMA6EA0A0J9YXQ4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
PNMA6EA0A0J9YXQ4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PNMA6EA0A0J9YXQ4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
PNMA6EA0A0J9YXQ4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.14■■■□□ 2.58
PNMA6EA0A0J9YXQ4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
PNMA6EA0A0J9YXQ4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.13■■■□□ 2.57
PNMA6EA0A0J9YXQ4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PNMA6EA0A0J9YXQ4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PNMA6EA0A0J9YXQ4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
PNMA6EA0A0J9YXQ4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PNMA6EA0A0J9YXQ4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PNMA6EA0A0J9YXQ4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
PNMA6EA0A0J9YXQ4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PNMA6EA0A0J9YXQ4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PNMA6EA0A0J9YXQ4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
PNMA6EA0A0J9YXQ4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PNMA6EA0A0J9YXQ4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PNMA6EA0A0J9YXQ4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
PNMA6EA0A0J9YXQ4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.1■■■□□ 2.57
PNMA6EA0A0J9YXQ4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.09■■■□□ 2.57
PNMA6EA0A0J9YXQ4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PNMA6EA0A0J9YXQ4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
PNMA6EA0A0J9YXQ4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.09■■■□□ 2.57
PNMA6EA0A0J9YXQ4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
PNMA6EA0A0J9YXQ4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PNMA6EA0A0J9YXQ4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.08■■■□□ 2.57
PNMA6EA0A0J9YXQ4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PNMA6EA0A0J9YXQ4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.08■■■□□ 2.57
PNMA6EA0A0J9YXQ4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
PNMA6EA0A0J9YXQ4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PNMA6EA0A0J9YXQ4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.07■■■□□ 2.56
PNMA6EA0A0J9YXQ4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PNMA6EA0A0J9YXQ4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
PNMA6EA0A0J9YXQ4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PNMA6EA0A0J9YXQ4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PNMA6EA0A0J9YXQ4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
PNMA6EA0A0J9YXQ4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.06■■■□□ 2.56
PNMA6EA0A0J9YXQ4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PNMA6EA0A0J9YXQ4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.06■■■□□ 2.56
PNMA6EA0A0J9YXQ4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.06■■■□□ 2.56
PNMA6EA0A0J9YXQ4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PNMA6EA0A0J9YXQ4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
PNMA6EA0A0J9YXQ4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PNMA6EA0A0J9YXQ4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
PNMA6EA0A0J9YXQ4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.04■■■□□ 2.56
PNMA6EA0A0J9YXQ4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.03■■■□□ 2.56
PNMA6EA0A0J9YXQ4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PNMA6EA0A0J9YXQ4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PNMA6EA0A0J9YXQ4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PNMA6EA0A0J9YXQ4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PNMA6EA0A0J9YXQ4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PNMA6EA0A0J9YXQ4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
PNMA6EA0A0J9YXQ4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
PNMA6EA0A0J9YXQ4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.01■■■□□ 2.55
PNMA6EA0A0J9YXQ4 AL449106.1-201ENST00000608517 1980 ntBASIC31.01■■■□□ 2.55
PNMA6EA0A0J9YXQ4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PNMA6EA0A0J9YXQ4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PNMA6EA0A0J9YXQ4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31■■■□□ 2.55
PNMA6EA0A0J9YXQ4 WHAMMP3-201ENST00000611636 1609 ntBASIC31■■■□□ 2.55
PNMA6EA0A0J9YXQ4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
PNMA6EA0A0J9YXQ4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.99■■■□□ 2.55
PNMA6EA0A0J9YXQ4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PNMA6EA0A0J9YXQ4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.99■■■□□ 2.55
PNMA6EA0A0J9YXQ4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
PNMA6EA0A0J9YXQ4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PNMA6EA0A0J9YXQ4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PNMA6EA0A0J9YXQ4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.97■■■□□ 2.55
PNMA6EA0A0J9YXQ4 AL359258.2-201ENST00000564063 1566 ntBASIC30.97■■■□□ 2.55
PNMA6EA0A0J9YXQ4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms