Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.99■□□□□ 0.95
TRAV38-1A0A0B4J264 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV38-1A0A0B4J264 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TRAV38-1A0A0B4J264 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV38-1A0A0B4J264 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV38-1A0A0B4J264 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.99■□□□□ 0.95
TRAV38-1A0A0B4J264 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.99■□□□□ 0.95
TRAV38-1A0A0B4J264 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV38-1A0A0B4J264 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRAV38-1A0A0B4J264 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV38-1A0A0B4J264 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.98■□□□□ 0.95
TRAV38-1A0A0B4J264 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV38-1A0A0B4J264 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV38-1A0A0B4J264 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV38-1A0A0B4J264 LINC01003-201ENST00000564834 1764 ntBASIC20.98■□□□□ 0.95
TRAV38-1A0A0B4J264 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV38-1A0A0B4J264 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV38-1A0A0B4J264 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV38-1A0A0B4J264 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
TRAV38-1A0A0B4J264 BX255925.1-201ENST00000566954 1854 ntBASIC20.96■□□□□ 0.95
TRAV38-1A0A0B4J264 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAV38-1A0A0B4J264 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAV38-1A0A0B4J264 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV38-1A0A0B4J264 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV38-1A0A0B4J264 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV38-1A0A0B4J264 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
TRAV38-1A0A0B4J264 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAV38-1A0A0B4J264 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV38-1A0A0B4J264 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV38-1A0A0B4J264 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV38-1A0A0B4J264 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV38-1A0A0B4J264 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV38-1A0A0B4J264 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRAV38-1A0A0B4J264 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRAV38-1A0A0B4J264 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV38-1A0A0B4J264 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAV38-1A0A0B4J264 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV38-1A0A0B4J264 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV38-1A0A0B4J264 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAV38-1A0A0B4J264 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRAV38-1A0A0B4J264 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV38-1A0A0B4J264 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAV38-1A0A0B4J264 AC126177.7-201ENST00000547904 679 ntBASIC20.93■□□□□ 0.94
TRAV38-1A0A0B4J264 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAV38-1A0A0B4J264 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV38-1A0A0B4J264 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV38-1A0A0B4J264 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV38-1A0A0B4J264 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV38-1A0A0B4J264 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRAV38-1A0A0B4J264 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV38-1A0A0B4J264 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.91■□□□□ 0.94
TRAV38-1A0A0B4J264 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
TRAV38-1A0A0B4J264 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TRAV38-1A0A0B4J264 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV38-1A0A0B4J264 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV38-1A0A0B4J264 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAV38-1A0A0B4J264 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAV38-1A0A0B4J264 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV38-1A0A0B4J264 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV38-1A0A0B4J264 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAV38-1A0A0B4J264 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV38-1A0A0B4J264 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TRAV38-1A0A0B4J264 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAV38-1A0A0B4J264 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAV38-1A0A0B4J264 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV38-1A0A0B4J264 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV38-1A0A0B4J264 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV38-1A0A0B4J264 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV38-1A0A0B4J264 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV38-1A0A0B4J264 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAV38-1A0A0B4J264 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TRAV38-1A0A0B4J264 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV38-1A0A0B4J264 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV38-1A0A0B4J264 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV38-1A0A0B4J264 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAV38-1A0A0B4J264 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV38-1A0A0B4J264 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV38-1A0A0B4J264 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRAV38-1A0A0B4J264 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV38-1A0A0B4J264 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAV38-1A0A0B4J264 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV38-1A0A0B4J264 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV38-1A0A0B4J264 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV38-1A0A0B4J264 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV38-1A0A0B4J264 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAV38-1A0A0B4J264 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.84■□□□□ 0.93
TRAV38-1A0A0B4J264 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAV38-1A0A0B4J264 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV38-1A0A0B4J264 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAV38-1A0A0B4J264 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAV38-1A0A0B4J264 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.83■□□□□ 0.93
TRAV38-1A0A0B4J264 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV38-1A0A0B4J264 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRAV38-1A0A0B4J264 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV38-1A0A0B4J264 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.83■□□□□ 0.92
TRAV38-1A0A0B4J264 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV38-1A0A0B4J264 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAV38-1A0A0B4J264 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV38-1A0A0B4J264 WHAMMP3-201ENST00000611636 1609 ntBASIC20.82■□□□□ 0.92
TRAV38-1A0A0B4J264 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms