Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LSM4Q9Y4Z0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM4Q9Y4Z0 AC100797.4-201ENST00000631653 1827 ntBASIC20.06■□□□□ 0.8
LSM4Q9Y4Z0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 AC021231.2-201ENST00000594613 730 ntBASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 AC135731.1-201ENST00000569415 2548 ntBASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM4Q9Y4Z0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.03■□□□□ 0.8
LSM4Q9Y4Z0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM4Q9Y4Z0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM4Q9Y4Z0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LSM4Q9Y4Z0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.02■□□□□ 0.8
LSM4Q9Y4Z0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LSM4Q9Y4Z0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LSM4Q9Y4Z0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSM4Q9Y4Z0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.01■□□□□ 0.79
LSM4Q9Y4Z0 AP002414.2-202ENST00000590929 1450 ntBASIC20■□□□□ 0.79
LSM4Q9Y4Z0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM4Q9Y4Z0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20■□□□□ 0.79
LSM4Q9Y4Z0 MIR4449-201ENST00000578365 66 ntBASIC20■□□□□ 0.79
LSM4Q9Y4Z0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSM4Q9Y4Z0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20■□□□□ 0.79
LSM4Q9Y4Z0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSM4Q9Y4Z0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.99■□□□□ 0.79
LSM4Q9Y4Z0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
LSM4Q9Y4Z0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM4Q9Y4Z0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM4Q9Y4Z0 AL449106.1-201ENST00000608517 1980 ntBASIC19.99■□□□□ 0.79
LSM4Q9Y4Z0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 MIR639-201ENST00000384974 98 ntBASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LSM4Q9Y4Z0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.97■□□□□ 0.79
LSM4Q9Y4Z0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM4Q9Y4Z0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 AC108673.1-201ENST00000510422 1159 ntBASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSM4Q9Y4Z0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.95■□□□□ 0.78
LSM4Q9Y4Z0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM4Q9Y4Z0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM4Q9Y4Z0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM4Q9Y4Z0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM4Q9Y4Z0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.94■□□□□ 0.78
LSM4Q9Y4Z0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 MIR6090-201ENST00000622481 60 ntBASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM4Q9Y4Z0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM4Q9Y4Z0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM4Q9Y4Z0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM4Q9Y4Z0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM4Q9Y4Z0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 AC091060.1-201ENST00000623524 1766 ntBASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 MIR3648-2-201ENST00000581792 180 ntBASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 MIR3648-1-201ENST00000615959 180 ntBASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM4Q9Y4Z0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM4Q9Y4Z0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.88■□□□□ 0.77
LSM4Q9Y4Z0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.88■□□□□ 0.77
LSM4Q9Y4Z0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM4Q9Y4Z0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.88■□□□□ 0.77
LSM4Q9Y4Z0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms