Protein–RNA interactions for Protein: Q9UQV4

LAMP3, Lysosome-associated membrane glycoprotein 3, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3Q9UQV4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LAMP3Q9UQV4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LAMP3Q9UQV4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LAMP3Q9UQV4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.76■■□□□ 1.07
LAMP3Q9UQV4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.76■■□□□ 1.07
LAMP3Q9UQV4 MIR219A2-201ENST00000608502 1504 ntBASIC21.75■■□□□ 1.07
LAMP3Q9UQV4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LAMP3Q9UQV4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAMP3Q9UQV4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
LAMP3Q9UQV4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAMP3Q9UQV4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
LAMP3Q9UQV4 AC060814.1-201ENST00000554326 538 ntBASIC21.74■■□□□ 1.07
LAMP3Q9UQV4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP3Q9UQV4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAMP3Q9UQV4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.73■■□□□ 1.07
LAMP3Q9UQV4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LAMP3Q9UQV4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMP3Q9UQV4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMP3Q9UQV4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.73■■□□□ 1.07
LAMP3Q9UQV4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
LAMP3Q9UQV4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMP3Q9UQV4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.73■■□□□ 1.07
LAMP3Q9UQV4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LAMP3Q9UQV4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.72■■□□□ 1.07
LAMP3Q9UQV4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMP3Q9UQV4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMP3Q9UQV4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LAMP3Q9UQV4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LAMP3Q9UQV4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.71■■□□□ 1.07
LAMP3Q9UQV4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.71■■□□□ 1.07
LAMP3Q9UQV4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LAMP3Q9UQV4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LAMP3Q9UQV4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
LAMP3Q9UQV4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LAMP3Q9UQV4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LAMP3Q9UQV4 AC012354.3-201ENST00000623734 483 ntBASIC21.7■■□□□ 1.06
LAMP3Q9UQV4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.7■■□□□ 1.06
LAMP3Q9UQV4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LAMP3Q9UQV4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
LAMP3Q9UQV4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LAMP3Q9UQV4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMP3Q9UQV4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LAMP3Q9UQV4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMP3Q9UQV4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
LAMP3Q9UQV4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LAMP3Q9UQV4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMP3Q9UQV4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.68■■□□□ 1.06
LAMP3Q9UQV4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LAMP3Q9UQV4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMP3Q9UQV4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMP3Q9UQV4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMP3Q9UQV4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LAMP3Q9UQV4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.67■■□□□ 1.06
LAMP3Q9UQV4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LAMP3Q9UQV4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.66■■□□□ 1.06
LAMP3Q9UQV4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LAMP3Q9UQV4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LAMP3Q9UQV4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.66■■□□□ 1.06
LAMP3Q9UQV4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LAMP3Q9UQV4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LAMP3Q9UQV4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
LAMP3Q9UQV4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LAMP3Q9UQV4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.65■■□□□ 1.06
LAMP3Q9UQV4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.64■■□□□ 1.05
LAMP3Q9UQV4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LAMP3Q9UQV4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LAMP3Q9UQV4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
LAMP3Q9UQV4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LAMP3Q9UQV4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LAMP3Q9UQV4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LAMP3Q9UQV4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LAMP3Q9UQV4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.63■■□□□ 1.05
LAMP3Q9UQV4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.63■■□□□ 1.05
LAMP3Q9UQV4 AC126177.7-201ENST00000547904 679 ntBASIC21.63■■□□□ 1.05
LAMP3Q9UQV4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LAMP3Q9UQV4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LAMP3Q9UQV4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.63■■□□□ 1.05
LAMP3Q9UQV4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
LAMP3Q9UQV4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.63■■□□□ 1.05
LAMP3Q9UQV4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.62■■□□□ 1.05
LAMP3Q9UQV4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LAMP3Q9UQV4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
LAMP3Q9UQV4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LAMP3Q9UQV4 U85056.1-201ENST00000616429 682 ntBASIC21.62■■□□□ 1.05
LAMP3Q9UQV4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
LAMP3Q9UQV4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.62■■□□□ 1.05
LAMP3Q9UQV4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LAMP3Q9UQV4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
LAMP3Q9UQV4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LAMP3Q9UQV4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.6■■□□□ 1.05
LAMP3Q9UQV4 AL033527.3-201ENST00000566366 1196 ntBASIC21.6■■□□□ 1.05
LAMP3Q9UQV4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.59■■□□□ 1.05
LAMP3Q9UQV4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.59■■□□□ 1.05
LAMP3Q9UQV4 AC092296.2-201ENST00000589470 999 ntBASIC21.59■■□□□ 1.05
LAMP3Q9UQV4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
LAMP3Q9UQV4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LAMP3Q9UQV4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
LAMP3Q9UQV4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LAMP3Q9UQV4 ECEL1P2-201ENST00000461596 1295 ntBASIC21.56■■□□□ 1.04
LAMP3Q9UQV4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms