Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
SPG7Q9UQ90 AL157400.5-201ENST00000507624 621 ntBASIC33.33■■■□□ 2.93
SPG7Q9UQ90 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC33.33■■■□□ 2.93
SPG7Q9UQ90 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
SPG7Q9UQ90 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC33.32■■■□□ 2.92
SPG7Q9UQ90 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC33.32■■■□□ 2.92
SPG7Q9UQ90 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
SPG7Q9UQ90 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC33.3■■■□□ 2.92
SPG7Q9UQ90 TSPY13P-201ENST00000338964 914 ntBASIC33.3■■■□□ 2.92
SPG7Q9UQ90 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC33.3■■■□□ 2.92
SPG7Q9UQ90 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
SPG7Q9UQ90 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
SPG7Q9UQ90 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
SPG7Q9UQ90 AC004987.1-201ENST00000428627 508 ntBASIC33.29■■■□□ 2.92
SPG7Q9UQ90 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC33.29■■■□□ 2.92
SPG7Q9UQ90 AC100797.4-201ENST00000631653 1827 ntBASIC33.29■■■□□ 2.92
SPG7Q9UQ90 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
SPG7Q9UQ90 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
SPG7Q9UQ90 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
SPG7Q9UQ90 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
SPG7Q9UQ90 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SPG7Q9UQ90 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
SPG7Q9UQ90 ATP5G2P3-201ENST00000429083 425 ntBASIC33.27■■■□□ 2.92
SPG7Q9UQ90 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
SPG7Q9UQ90 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
SPG7Q9UQ90 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
SPG7Q9UQ90 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC33.26■■■□□ 2.91
SPG7Q9UQ90 GFER-205ENST00000569451 517 ntTSL 5 BASIC33.26■■■□□ 2.91
SPG7Q9UQ90 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
SPG7Q9UQ90 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC33.25■■■□□ 2.91
SPG7Q9UQ90 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
SPG7Q9UQ90 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC33.23■■■□□ 2.91
SPG7Q9UQ90 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
SPG7Q9UQ90 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC33.22■■■□□ 2.91
SPG7Q9UQ90 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SPG7Q9UQ90 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC33.21■■■□□ 2.91
SPG7Q9UQ90 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SPG7Q9UQ90 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC33.21■■■□□ 2.91
SPG7Q9UQ90 AC007029.1-201ENST00000604183 313 ntBASIC33.21■■■□□ 2.91
SPG7Q9UQ90 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SPG7Q9UQ90 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.91
SPG7Q9UQ90 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC33.2■■■□□ 2.91
SPG7Q9UQ90 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
SPG7Q9UQ90 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
SPG7Q9UQ90 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC33.19■■■□□ 2.9
SPG7Q9UQ90 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC33.19■■■□□ 2.9
SPG7Q9UQ90 REST-210ENST00000638187 1334 ntTSL 5 BASIC33.19■■■□□ 2.9
SPG7Q9UQ90 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC33.18■■■□□ 2.9
SPG7Q9UQ90 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC33.17■■■□□ 2.9
SPG7Q9UQ90 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
SPG7Q9UQ90 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SPG7Q9UQ90 GUK1-208ENST00000366728 842 ntTSL 2 BASIC33.17■■■□□ 2.9
SPG7Q9UQ90 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SPG7Q9UQ90 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
SPG7Q9UQ90 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
SPG7Q9UQ90 AL359258.2-201ENST00000564063 1566 ntBASIC33.14■■■□□ 2.9
SPG7Q9UQ90 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
SPG7Q9UQ90 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
SPG7Q9UQ90 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SPG7Q9UQ90 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SPG7Q9UQ90 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
SPG7Q9UQ90 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC33.13■■■□□ 2.89
SPG7Q9UQ90 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC33.13■■■□□ 2.89
SPG7Q9UQ90 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC33.13■■■□□ 2.89
SPG7Q9UQ90 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC33.12■■■□□ 2.89
SPG7Q9UQ90 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SPG7Q9UQ90 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
SPG7Q9UQ90 SMPD5-203ENST00000639008 1464 ntBASIC33.12■■■□□ 2.89
SPG7Q9UQ90 ST7-205ENST00000393446 2114 ntTSL 5 BASIC33.11■■■□□ 2.89
SPG7Q9UQ90 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SPG7Q9UQ90 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SPG7Q9UQ90 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
SPG7Q9UQ90 AC009831.1-201ENST00000580420 1582 ntBASIC33.09■■■□□ 2.89
SPG7Q9UQ90 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC33.09■■■□□ 2.89
SPG7Q9UQ90 AC133552.2-201ENST00000619106 1032 ntBASIC33.09■■■□□ 2.89
SPG7Q9UQ90 AC129492.7-201ENST00000622992 756 ntBASIC33.09■■■□□ 2.89
SPG7Q9UQ90 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SPG7Q9UQ90 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
SPG7Q9UQ90 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SPG7Q9UQ90 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
SPG7Q9UQ90 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SPG7Q9UQ90 AL592293.1-201ENST00000502889 1188 ntBASIC33.07■■■□□ 2.88
SPG7Q9UQ90 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC33.06■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms