Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CISHQ9NSE2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.99■■□□□ 1.91
CISHQ9NSE2 AC018358.1-201ENST00000631079 1402 ntBASIC26.99■■□□□ 1.91
CISHQ9NSE2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.98■■□□□ 1.91
CISHQ9NSE2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CISHQ9NSE2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CISHQ9NSE2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
CISHQ9NSE2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
CISHQ9NSE2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CISHQ9NSE2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CISHQ9NSE2 LINC01003-201ENST00000564834 1764 ntBASIC26.96■■□□□ 1.91
CISHQ9NSE2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CISHQ9NSE2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.95■■□□□ 1.9
CISHQ9NSE2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.95■■□□□ 1.9
CISHQ9NSE2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CISHQ9NSE2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CISHQ9NSE2 BX255925.1-201ENST00000566954 1854 ntBASIC26.94■■□□□ 1.9
CISHQ9NSE2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.93■■□□□ 1.9
CISHQ9NSE2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CISHQ9NSE2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.93■■□□□ 1.9
CISHQ9NSE2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CISHQ9NSE2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CISHQ9NSE2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CISHQ9NSE2 AC008813.1-201ENST00000536597 885 ntBASIC26.92■■□□□ 1.9
CISHQ9NSE2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CISHQ9NSE2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
CISHQ9NSE2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
CISHQ9NSE2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CISHQ9NSE2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
CISHQ9NSE2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.9■■□□□ 1.9
CISHQ9NSE2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CISHQ9NSE2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CISHQ9NSE2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.89■■□□□ 1.9
CISHQ9NSE2 HLA-V-202ENST00000446817 847 ntBASIC26.89■■□□□ 1.9
CISHQ9NSE2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.89■■□□□ 1.9
CISHQ9NSE2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
CISHQ9NSE2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
CISHQ9NSE2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CISHQ9NSE2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
CISHQ9NSE2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CISHQ9NSE2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CISHQ9NSE2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CISHQ9NSE2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CISHQ9NSE2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CISHQ9NSE2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CISHQ9NSE2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CISHQ9NSE2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
CISHQ9NSE2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.87■■□□□ 1.89
CISHQ9NSE2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CISHQ9NSE2 MIR639-201ENST00000384974 98 ntBASIC26.86■■□□□ 1.89
CISHQ9NSE2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.86■■□□□ 1.89
CISHQ9NSE2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CISHQ9NSE2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CISHQ9NSE2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CISHQ9NSE2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CISHQ9NSE2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.85■■□□□ 1.89
CISHQ9NSE2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CISHQ9NSE2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CISHQ9NSE2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
CISHQ9NSE2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
CISHQ9NSE2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CISHQ9NSE2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.84■■□□□ 1.89
CISHQ9NSE2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CISHQ9NSE2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CISHQ9NSE2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CISHQ9NSE2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CISHQ9NSE2 AC148477.6-201ENST00000623746 465 ntBASIC26.82■■□□□ 1.88
CISHQ9NSE2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.81■■□□□ 1.88
CISHQ9NSE2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.81■■□□□ 1.88
CISHQ9NSE2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.81■■□□□ 1.88
CISHQ9NSE2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CISHQ9NSE2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
CISHQ9NSE2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CISHQ9NSE2 MIR219A2-201ENST00000608502 1504 ntBASIC26.8■■□□□ 1.88
CISHQ9NSE2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CISHQ9NSE2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
CISHQ9NSE2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CISHQ9NSE2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
CISHQ9NSE2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CISHQ9NSE2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.76■■□□□ 1.88
CISHQ9NSE2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CISHQ9NSE2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CISHQ9NSE2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CISHQ9NSE2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CISHQ9NSE2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CISHQ9NSE2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CISHQ9NSE2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
CISHQ9NSE2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.75■■□□□ 1.87
CISHQ9NSE2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.75■■□□□ 1.87
CISHQ9NSE2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
CISHQ9NSE2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.75■■□□□ 1.87
CISHQ9NSE2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CISHQ9NSE2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CISHQ9NSE2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CISHQ9NSE2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CISHQ9NSE2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CISHQ9NSE2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.72■■□□□ 1.87
CISHQ9NSE2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
CISHQ9NSE2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.71■■□□□ 1.87
CISHQ9NSE2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms