Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.56■■■■□ 3.44
CISHQ9NSE2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
CISHQ9NSE2 AL356512.1-201ENST00000607453 1739 ntBASIC35.64■■■■□ 3.3
CISHQ9NSE2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
CISHQ9NSE2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CISHQ9NSE2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CISHQ9NSE2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.14■■■■□ 3.22
CISHQ9NSE2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.98■■■■□ 3.19
CISHQ9NSE2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.84■■■■□ 3.17
CISHQ9NSE2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.69■■■■□ 3.14
CISHQ9NSE2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.67■■■■□ 3.14
CISHQ9NSE2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.52■■■■□ 3.12
CISHQ9NSE2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.27■■■■□ 3.08
CISHQ9NSE2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.18■■■■□ 3.06
CISHQ9NSE2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
CISHQ9NSE2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.84■■■■□ 3.01
CISHQ9NSE2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.66■■■□□ 2.98
CISHQ9NSE2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.65■■■□□ 2.98
CISHQ9NSE2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.62■■■□□ 2.97
CISHQ9NSE2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
CISHQ9NSE2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.52■■■□□ 2.96
CISHQ9NSE2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.47■■■□□ 2.95
CISHQ9NSE2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.37■■■□□ 2.93
CISHQ9NSE2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.31■■■□□ 2.92
CISHQ9NSE2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CISHQ9NSE2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.15■■■□□ 2.9
CISHQ9NSE2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CISHQ9NSE2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CISHQ9NSE2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
CISHQ9NSE2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CISHQ9NSE2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.76■■■□□ 2.83
CISHQ9NSE2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.74■■■□□ 2.83
CISHQ9NSE2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.67■■■□□ 2.82
CISHQ9NSE2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CISHQ9NSE2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CISHQ9NSE2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CISHQ9NSE2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.59■■■□□ 2.81
CISHQ9NSE2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CISHQ9NSE2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CISHQ9NSE2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CISHQ9NSE2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CISHQ9NSE2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
CISHQ9NSE2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CISHQ9NSE2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.41■■■□□ 2.78
CISHQ9NSE2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.35■■■□□ 2.77
CISHQ9NSE2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CISHQ9NSE2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CISHQ9NSE2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
CISHQ9NSE2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.21■■■□□ 2.75
CISHQ9NSE2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.17■■■□□ 2.74
CISHQ9NSE2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
CISHQ9NSE2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
CISHQ9NSE2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CISHQ9NSE2 AC015813.7-201ENST00000623294 581 ntBASIC32.01■■■□□ 2.71
CISHQ9NSE2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CISHQ9NSE2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
CISHQ9NSE2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.86■■■□□ 2.69
CISHQ9NSE2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CISHQ9NSE2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CISHQ9NSE2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.72■■■□□ 2.67
CISHQ9NSE2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CISHQ9NSE2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.67■■■□□ 2.66
CISHQ9NSE2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CISHQ9NSE2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CISHQ9NSE2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CISHQ9NSE2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CISHQ9NSE2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.62■■■□□ 2.65
CISHQ9NSE2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
CISHQ9NSE2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CISHQ9NSE2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
CISHQ9NSE2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CISHQ9NSE2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
CISHQ9NSE2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.52■■■□□ 2.64
CISHQ9NSE2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CISHQ9NSE2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CISHQ9NSE2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CISHQ9NSE2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CISHQ9NSE2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CISHQ9NSE2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.47■■■□□ 2.63
CISHQ9NSE2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.46■■■□□ 2.63
CISHQ9NSE2 AC006077.2-201ENST00000623591 457 ntBASIC31.43■■■□□ 2.62
CISHQ9NSE2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CISHQ9NSE2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CISHQ9NSE2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CISHQ9NSE2 ZNRF2P1-201ENST00000441407 443 ntBASIC31.26■■■□□ 2.59
CISHQ9NSE2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CISHQ9NSE2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CISHQ9NSE2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
CISHQ9NSE2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
CISHQ9NSE2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CISHQ9NSE2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CISHQ9NSE2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
CISHQ9NSE2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CISHQ9NSE2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CISHQ9NSE2 AC145285.7-201ENST00000614819 1539 ntBASIC31.06■■■□□ 2.56
CISHQ9NSE2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CISHQ9NSE2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.99■■■□□ 2.55
CISHQ9NSE2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
CISHQ9NSE2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.95■■■□□ 2.55
CISHQ9NSE2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms