Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.95■■■□□ 2.23
A1CFQ9NQ94 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
A1CFQ9NQ94 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.95■■■□□ 2.22
A1CFQ9NQ94 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.94■■■□□ 2.22
A1CFQ9NQ94 AL139393.2-201ENST00000608721 2025 ntBASIC28.93■■■□□ 2.22
A1CFQ9NQ94 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.93■■■□□ 2.22
A1CFQ9NQ94 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
A1CFQ9NQ94 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
A1CFQ9NQ94 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
A1CFQ9NQ94 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.92■■■□□ 2.22
A1CFQ9NQ94 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.92■■■□□ 2.22
A1CFQ9NQ94 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
A1CFQ9NQ94 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
A1CFQ9NQ94 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
A1CFQ9NQ94 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.9■■■□□ 2.22
A1CFQ9NQ94 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.89■■■□□ 2.22
A1CFQ9NQ94 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
A1CFQ9NQ94 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.89■■■□□ 2.21
A1CFQ9NQ94 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.88■■■□□ 2.21
A1CFQ9NQ94 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.88■■■□□ 2.21
A1CFQ9NQ94 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
A1CFQ9NQ94 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.88■■■□□ 2.21
A1CFQ9NQ94 AC126177.7-201ENST00000547904 679 ntBASIC28.87■■■□□ 2.21
A1CFQ9NQ94 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.87■■■□□ 2.21
A1CFQ9NQ94 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.87■■■□□ 2.21
A1CFQ9NQ94 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
A1CFQ9NQ94 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
A1CFQ9NQ94 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
A1CFQ9NQ94 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
A1CFQ9NQ94 U85056.1-201ENST00000616429 682 ntBASIC28.86■■■□□ 2.21
A1CFQ9NQ94 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
A1CFQ9NQ94 ECEL1P2-201ENST00000461596 1295 ntBASIC28.85■■■□□ 2.21
A1CFQ9NQ94 ABCB10P3-201ENST00000561950 2166 ntBASIC28.85■■■□□ 2.21
A1CFQ9NQ94 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
A1CFQ9NQ94 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
A1CFQ9NQ94 AL157400.5-201ENST00000507624 621 ntBASIC28.84■■■□□ 2.21
A1CFQ9NQ94 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.84■■■□□ 2.21
A1CFQ9NQ94 AC012354.3-201ENST00000623734 483 ntBASIC28.84■■■□□ 2.21
A1CFQ9NQ94 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
A1CFQ9NQ94 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
A1CFQ9NQ94 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
A1CFQ9NQ94 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
A1CFQ9NQ94 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.83■■■□□ 2.21
A1CFQ9NQ94 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
A1CFQ9NQ94 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
A1CFQ9NQ94 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
A1CFQ9NQ94 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.82■■■□□ 2.2
A1CFQ9NQ94 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
A1CFQ9NQ94 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
A1CFQ9NQ94 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
A1CFQ9NQ94 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
A1CFQ9NQ94 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.81■■■□□ 2.2
A1CFQ9NQ94 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
A1CFQ9NQ94 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.81■■■□□ 2.2
A1CFQ9NQ94 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
A1CFQ9NQ94 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.8■■■□□ 2.2
A1CFQ9NQ94 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
A1CFQ9NQ94 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
A1CFQ9NQ94 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
A1CFQ9NQ94 ABCB10P1-201ENST00000614297 2181 ntBASIC28.79■■■□□ 2.2
A1CFQ9NQ94 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
A1CFQ9NQ94 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.79■■■□□ 2.2
A1CFQ9NQ94 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
A1CFQ9NQ94 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
A1CFQ9NQ94 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
A1CFQ9NQ94 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
A1CFQ9NQ94 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.78■■■□□ 2.2
A1CFQ9NQ94 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.78■■■□□ 2.2
A1CFQ9NQ94 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
A1CFQ9NQ94 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
A1CFQ9NQ94 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
A1CFQ9NQ94 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.77■■■□□ 2.2
A1CFQ9NQ94 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
A1CFQ9NQ94 AC018358.1-201ENST00000631079 1402 ntBASIC28.77■■■□□ 2.2
A1CFQ9NQ94 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.76■■■□□ 2.19
A1CFQ9NQ94 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
A1CFQ9NQ94 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.75■■■□□ 2.19
A1CFQ9NQ94 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
A1CFQ9NQ94 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.75■■■□□ 2.19
A1CFQ9NQ94 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
A1CFQ9NQ94 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
A1CFQ9NQ94 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.74■■■□□ 2.19
A1CFQ9NQ94 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
A1CFQ9NQ94 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.74■■■□□ 2.19
A1CFQ9NQ94 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
A1CFQ9NQ94 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
A1CFQ9NQ94 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
A1CFQ9NQ94 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
A1CFQ9NQ94 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.72■■■□□ 2.19
A1CFQ9NQ94 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
A1CFQ9NQ94 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
A1CFQ9NQ94 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
A1CFQ9NQ94 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
A1CFQ9NQ94 AL359258.2-201ENST00000564063 1566 ntBASIC28.71■■■□□ 2.19
A1CFQ9NQ94 KRT18P60-201ENST00000312876 1297 ntBASIC28.7■■■□□ 2.18
A1CFQ9NQ94 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
A1CFQ9NQ94 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.7■■■□□ 2.18
A1CFQ9NQ94 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
A1CFQ9NQ94 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
A1CFQ9NQ94 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.69■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms