Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GAFA1Q96PS6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
GAFA1Q96PS6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GAFA1Q96PS6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GAFA1Q96PS6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GAFA1Q96PS6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GAFA1Q96PS6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.03■□□□□ 0.96
GAFA1Q96PS6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.03■□□□□ 0.96
GAFA1Q96PS6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.03■□□□□ 0.96
GAFA1Q96PS6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.02■□□□□ 0.96
GAFA1Q96PS6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
GAFA1Q96PS6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
GAFA1Q96PS6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GAFA1Q96PS6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GAFA1Q96PS6 AC008813.1-201ENST00000536597 885 ntBASIC21.01■□□□□ 0.95
GAFA1Q96PS6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GAFA1Q96PS6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GAFA1Q96PS6 LINC01003-201ENST00000564834 1764 ntBASIC21■□□□□ 0.95
GAFA1Q96PS6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GAFA1Q96PS6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21■□□□□ 0.95
GAFA1Q96PS6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GAFA1Q96PS6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GAFA1Q96PS6 BX255925.1-201ENST00000566954 1854 ntBASIC21■□□□□ 0.95
GAFA1Q96PS6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GAFA1Q96PS6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GAFA1Q96PS6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
GAFA1Q96PS6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.98■□□□□ 0.95
GAFA1Q96PS6 HLA-V-202ENST00000446817 847 ntBASIC20.98■□□□□ 0.95
GAFA1Q96PS6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.98■□□□□ 0.95
GAFA1Q96PS6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.98■□□□□ 0.95
GAFA1Q96PS6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GAFA1Q96PS6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAFA1Q96PS6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAFA1Q96PS6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
GAFA1Q96PS6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.97■□□□□ 0.95
GAFA1Q96PS6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
GAFA1Q96PS6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GAFA1Q96PS6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.96■□□□□ 0.95
GAFA1Q96PS6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.96■□□□□ 0.95
GAFA1Q96PS6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GAFA1Q96PS6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GAFA1Q96PS6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
GAFA1Q96PS6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
GAFA1Q96PS6 MIR639-201ENST00000384974 98 ntBASIC20.95■□□□□ 0.94
GAFA1Q96PS6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.95■□□□□ 0.94
GAFA1Q96PS6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAFA1Q96PS6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAFA1Q96PS6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAFA1Q96PS6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAFA1Q96PS6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GAFA1Q96PS6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
GAFA1Q96PS6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAFA1Q96PS6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
GAFA1Q96PS6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
GAFA1Q96PS6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
GAFA1Q96PS6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GAFA1Q96PS6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAFA1Q96PS6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAFA1Q96PS6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.92■□□□□ 0.94
GAFA1Q96PS6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.92■□□□□ 0.94
GAFA1Q96PS6 AC148477.6-201ENST00000623746 465 ntBASIC20.92■□□□□ 0.94
GAFA1Q96PS6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
GAFA1Q96PS6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GAFA1Q96PS6 MIR219A2-201ENST00000608502 1504 ntBASIC20.91■□□□□ 0.94
GAFA1Q96PS6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.9■□□□□ 0.94
GAFA1Q96PS6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GAFA1Q96PS6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GAFA1Q96PS6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
GAFA1Q96PS6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GAFA1Q96PS6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GAFA1Q96PS6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.89■□□□□ 0.93
GAFA1Q96PS6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GAFA1Q96PS6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GAFA1Q96PS6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.88■□□□□ 0.93
GAFA1Q96PS6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
GAFA1Q96PS6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GAFA1Q96PS6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
GAFA1Q96PS6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GAFA1Q96PS6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GAFA1Q96PS6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GAFA1Q96PS6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GAFA1Q96PS6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GAFA1Q96PS6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
GAFA1Q96PS6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
GAFA1Q96PS6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GAFA1Q96PS6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GAFA1Q96PS6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GAFA1Q96PS6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
GAFA1Q96PS6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
GAFA1Q96PS6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.86■□□□□ 0.93
GAFA1Q96PS6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
GAFA1Q96PS6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GAFA1Q96PS6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
GAFA1Q96PS6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.84■□□□□ 0.93
GAFA1Q96PS6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GAFA1Q96PS6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.83■□□□□ 0.92
GAFA1Q96PS6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GAFA1Q96PS6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GAFA1Q96PS6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GAFA1Q96PS6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms