Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RFFLQ8WZ73 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RFFLQ8WZ73 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFFLQ8WZ73 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFFLQ8WZ73 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
RFFLQ8WZ73 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RFFLQ8WZ73 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFFLQ8WZ73 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
RFFLQ8WZ73 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFFLQ8WZ73 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
RFFLQ8WZ73 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
RFFLQ8WZ73 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RFFLQ8WZ73 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RFFLQ8WZ73 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RFFLQ8WZ73 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.67■■□□□ 1.86
RFFLQ8WZ73 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
RFFLQ8WZ73 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.67■■□□□ 1.86
RFFLQ8WZ73 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.66■■□□□ 1.86
RFFLQ8WZ73 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
RFFLQ8WZ73 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RFFLQ8WZ73 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
RFFLQ8WZ73 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.65■■□□□ 1.86
RFFLQ8WZ73 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.65■■□□□ 1.86
RFFLQ8WZ73 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RFFLQ8WZ73 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RFFLQ8WZ73 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.65■■□□□ 1.86
RFFLQ8WZ73 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
RFFLQ8WZ73 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
RFFLQ8WZ73 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RFFLQ8WZ73 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.63■■□□□ 1.85
RFFLQ8WZ73 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.63■■□□□ 1.85
RFFLQ8WZ73 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RFFLQ8WZ73 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RFFLQ8WZ73 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.62■■□□□ 1.85
RFFLQ8WZ73 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RFFLQ8WZ73 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
RFFLQ8WZ73 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
RFFLQ8WZ73 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.61■■□□□ 1.85
RFFLQ8WZ73 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RFFLQ8WZ73 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RFFLQ8WZ73 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RFFLQ8WZ73 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
RFFLQ8WZ73 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.6■■□□□ 1.85
RFFLQ8WZ73 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.6■■□□□ 1.85
RFFLQ8WZ73 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.59■■□□□ 1.85
RFFLQ8WZ73 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.59■■□□□ 1.85
RFFLQ8WZ73 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.59■■□□□ 1.85
RFFLQ8WZ73 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.59■■□□□ 1.85
RFFLQ8WZ73 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.59■■□□□ 1.85
RFFLQ8WZ73 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RFFLQ8WZ73 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.58■■□□□ 1.85
RFFLQ8WZ73 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RFFLQ8WZ73 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFFLQ8WZ73 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
RFFLQ8WZ73 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
RFFLQ8WZ73 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.57■■□□□ 1.84
RFFLQ8WZ73 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFFLQ8WZ73 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFFLQ8WZ73 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.57■■□□□ 1.84
RFFLQ8WZ73 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RFFLQ8WZ73 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
RFFLQ8WZ73 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RFFLQ8WZ73 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RFFLQ8WZ73 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
RFFLQ8WZ73 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFFLQ8WZ73 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RFFLQ8WZ73 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
RFFLQ8WZ73 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFFLQ8WZ73 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.55■■□□□ 1.84
RFFLQ8WZ73 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFFLQ8WZ73 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFFLQ8WZ73 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.54■■□□□ 1.84
RFFLQ8WZ73 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.54■■□□□ 1.84
RFFLQ8WZ73 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RFFLQ8WZ73 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RFFLQ8WZ73 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
RFFLQ8WZ73 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RFFLQ8WZ73 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
RFFLQ8WZ73 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RFFLQ8WZ73 HLA-V-202ENST00000446817 847 ntBASIC26.53■■□□□ 1.84
RFFLQ8WZ73 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
RFFLQ8WZ73 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RFFLQ8WZ73 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.52■■□□□ 1.84
RFFLQ8WZ73 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.52■■□□□ 1.84
RFFLQ8WZ73 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.52■■□□□ 1.84
RFFLQ8WZ73 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.52■■□□□ 1.84
RFFLQ8WZ73 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFFLQ8WZ73 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFFLQ8WZ73 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFFLQ8WZ73 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.51■■□□□ 1.83
RFFLQ8WZ73 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFFLQ8WZ73 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RFFLQ8WZ73 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.5■■□□□ 1.83
RFFLQ8WZ73 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RFFLQ8WZ73 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.5■■□□□ 1.83
RFFLQ8WZ73 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.5■■□□□ 1.83
RFFLQ8WZ73 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RFFLQ8WZ73 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.5■■□□□ 1.83
RFFLQ8WZ73 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
RFFLQ8WZ73 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms