Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RTN4IP1Q8WWV3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
RTN4IP1Q8WWV3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RTN4IP1Q8WWV3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4IP1Q8WWV3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4IP1Q8WWV3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4IP1Q8WWV3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RTN4IP1Q8WWV3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTN4IP1Q8WWV3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RTN4IP1Q8WWV3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21■□□□□ 0.95
RTN4IP1Q8WWV3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTN4IP1Q8WWV3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RTN4IP1Q8WWV3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.99■□□□□ 0.95
RTN4IP1Q8WWV3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.99■□□□□ 0.95
RTN4IP1Q8WWV3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4IP1Q8WWV3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTN4IP1Q8WWV3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4IP1Q8WWV3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4IP1Q8WWV3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.97■□□□□ 0.95
RTN4IP1Q8WWV3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RTN4IP1Q8WWV3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4IP1Q8WWV3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RTN4IP1Q8WWV3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4IP1Q8WWV3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.96■□□□□ 0.95
RTN4IP1Q8WWV3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.96■□□□□ 0.95
RTN4IP1Q8WWV3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4IP1Q8WWV3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4IP1Q8WWV3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4IP1Q8WWV3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4IP1Q8WWV3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.95■□□□□ 0.95
RTN4IP1Q8WWV3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.95■□□□□ 0.95
RTN4IP1Q8WWV3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4IP1Q8WWV3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4IP1Q8WWV3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4IP1Q8WWV3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4IP1Q8WWV3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4IP1Q8WWV3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.94■□□□□ 0.94
RTN4IP1Q8WWV3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4IP1Q8WWV3 RPS2P35-201ENST00000443417 897 ntBASIC20.94■□□□□ 0.94
RTN4IP1Q8WWV3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.94■□□□□ 0.94
RTN4IP1Q8WWV3 AP002414.2-202ENST00000590929 1450 ntBASIC20.94■□□□□ 0.94
RTN4IP1Q8WWV3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4IP1Q8WWV3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4IP1Q8WWV3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4IP1Q8WWV3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4IP1Q8WWV3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RTN4IP1Q8WWV3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4IP1Q8WWV3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.92■□□□□ 0.94
RTN4IP1Q8WWV3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4IP1Q8WWV3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4IP1Q8WWV3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4IP1Q8WWV3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RTN4IP1Q8WWV3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.91■□□□□ 0.94
RTN4IP1Q8WWV3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4IP1Q8WWV3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
RTN4IP1Q8WWV3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4IP1Q8WWV3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RTN4IP1Q8WWV3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RTN4IP1Q8WWV3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4IP1Q8WWV3 AC091060.1-201ENST00000623524 1766 ntBASIC20.9■□□□□ 0.94
RTN4IP1Q8WWV3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTN4IP1Q8WWV3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.89■□□□□ 0.94
RTN4IP1Q8WWV3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4IP1Q8WWV3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4IP1Q8WWV3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4IP1Q8WWV3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4IP1Q8WWV3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4IP1Q8WWV3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RTN4IP1Q8WWV3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4IP1Q8WWV3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4IP1Q8WWV3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4IP1Q8WWV3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.88■□□□□ 0.93
RTN4IP1Q8WWV3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4IP1Q8WWV3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.88■□□□□ 0.93
RTN4IP1Q8WWV3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4IP1Q8WWV3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.87■□□□□ 0.93
RTN4IP1Q8WWV3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4IP1Q8WWV3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4IP1Q8WWV3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4IP1Q8WWV3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4IP1Q8WWV3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RTN4IP1Q8WWV3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4IP1Q8WWV3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4IP1Q8WWV3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.86■□□□□ 0.93
RTN4IP1Q8WWV3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.86■□□□□ 0.93
RTN4IP1Q8WWV3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4IP1Q8WWV3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.86■□□□□ 0.93
RTN4IP1Q8WWV3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4IP1Q8WWV3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4IP1Q8WWV3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4IP1Q8WWV3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4IP1Q8WWV3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4IP1Q8WWV3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4IP1Q8WWV3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4IP1Q8WWV3 LINC00273-201ENST00000539813 1452 ntBASIC20.84■□□□□ 0.93
RTN4IP1Q8WWV3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
RTN4IP1Q8WWV3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.84■□□□□ 0.93
RTN4IP1Q8WWV3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN4IP1Q8WWV3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN4IP1Q8WWV3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms