Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
LINS1Q8NG48 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
LINS1Q8NG48 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.9■■■□□ 2.7
LINS1Q8NG48 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
LINS1Q8NG48 AC139426.1-201ENST00000568218 2529 ntBASIC31.89■■■□□ 2.7
LINS1Q8NG48 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
LINS1Q8NG48 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
LINS1Q8NG48 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
LINS1Q8NG48 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
LINS1Q8NG48 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
LINS1Q8NG48 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
LINS1Q8NG48 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LINS1Q8NG48 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LINS1Q8NG48 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
LINS1Q8NG48 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LINS1Q8NG48 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
LINS1Q8NG48 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.86■■■□□ 2.69
LINS1Q8NG48 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LINS1Q8NG48 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
LINS1Q8NG48 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
LINS1Q8NG48 GPX1-201ENST00000419349 1106 ntBASIC31.85■■■□□ 2.69
LINS1Q8NG48 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.85■■■□□ 2.69
LINS1Q8NG48 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.84■■■□□ 2.69
LINS1Q8NG48 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.84■■■□□ 2.69
LINS1Q8NG48 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
LINS1Q8NG48 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
LINS1Q8NG48 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
LINS1Q8NG48 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
LINS1Q8NG48 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
LINS1Q8NG48 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.83■■■□□ 2.69
LINS1Q8NG48 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
LINS1Q8NG48 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.82■■■□□ 2.69
LINS1Q8NG48 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
LINS1Q8NG48 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
LINS1Q8NG48 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.81■■■□□ 2.68
LINS1Q8NG48 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
LINS1Q8NG48 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.81■■■□□ 2.68
LINS1Q8NG48 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
LINS1Q8NG48 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
LINS1Q8NG48 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
LINS1Q8NG48 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.8■■■□□ 2.68
LINS1Q8NG48 AC022413.1-201ENST00000624602 984 ntBASIC31.8■■■□□ 2.68
LINS1Q8NG48 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
LINS1Q8NG48 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
LINS1Q8NG48 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
LINS1Q8NG48 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
LINS1Q8NG48 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.77■■■□□ 2.68
LINS1Q8NG48 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
LINS1Q8NG48 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
LINS1Q8NG48 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.76■■■□□ 2.67
LINS1Q8NG48 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.76■■■□□ 2.67
LINS1Q8NG48 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
LINS1Q8NG48 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
LINS1Q8NG48 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.75■■■□□ 2.67
LINS1Q8NG48 AC060814.1-201ENST00000554326 538 ntBASIC31.75■■■□□ 2.67
LINS1Q8NG48 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.75■■■□□ 2.67
LINS1Q8NG48 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
LINS1Q8NG48 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.75■■■□□ 2.67
LINS1Q8NG48 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
LINS1Q8NG48 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.74■■■□□ 2.67
LINS1Q8NG48 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.74■■■□□ 2.67
LINS1Q8NG48 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
LINS1Q8NG48 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.73■■■□□ 2.67
LINS1Q8NG48 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.73■■■□□ 2.67
LINS1Q8NG48 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
LINS1Q8NG48 RNF126P1-201ENST00000567452 1320 ntBASIC31.73■■■□□ 2.67
LINS1Q8NG48 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
LINS1Q8NG48 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
LINS1Q8NG48 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
LINS1Q8NG48 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
LINS1Q8NG48 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
LINS1Q8NG48 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
LINS1Q8NG48 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.7■■■□□ 2.67
LINS1Q8NG48 AC018358.1-201ENST00000631079 1402 ntBASIC31.7■■■□□ 2.67
LINS1Q8NG48 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
LINS1Q8NG48 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
LINS1Q8NG48 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
LINS1Q8NG48 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
LINS1Q8NG48 DRD5P2-201ENST00000421395 2012 ntBASIC31.7■■■□□ 2.66
LINS1Q8NG48 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
LINS1Q8NG48 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
LINS1Q8NG48 RARRES2P2-201ENST00000394842 485 ntBASIC31.69■■■□□ 2.66
LINS1Q8NG48 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.69■■■□□ 2.66
LINS1Q8NG48 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
LINS1Q8NG48 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
LINS1Q8NG48 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
LINS1Q8NG48 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
LINS1Q8NG48 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
LINS1Q8NG48 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
LINS1Q8NG48 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
LINS1Q8NG48 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
LINS1Q8NG48 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.65■■■□□ 2.66
LINS1Q8NG48 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
LINS1Q8NG48 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
LINS1Q8NG48 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.65■■■□□ 2.66
LINS1Q8NG48 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.65■■■□□ 2.66
LINS1Q8NG48 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
LINS1Q8NG48 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
LINS1Q8NG48 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
LINS1Q8NG48 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms