Protein–RNA interactions for Protein: Q8NE00

TMEM104, Transmembrane protein 104, humanhuman

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104Q8NE00 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM104Q8NE00 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEM104Q8NE00 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM104Q8NE00 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
TMEM104Q8NE00 AL449106.1-201ENST00000608517 1980 ntBASIC21.49■■□□□ 1.03
TMEM104Q8NE00 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM104Q8NE00 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM104Q8NE00 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM104Q8NE00 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.48■■□□□ 1.03
TMEM104Q8NE00 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM104Q8NE00 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.48■■□□□ 1.03
TMEM104Q8NE00 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TMEM104Q8NE00 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TMEM104Q8NE00 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TMEM104Q8NE00 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM104Q8NE00 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
TMEM104Q8NE00 AC108673.1-201ENST00000510422 1159 ntBASIC21.47■■□□□ 1.03
TMEM104Q8NE00 MIR6090-201ENST00000622481 60 ntBASIC21.47■■□□□ 1.03
TMEM104Q8NE00 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.47■■□□□ 1.03
TMEM104Q8NE00 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM104Q8NE00 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM104Q8NE00 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM104Q8NE00 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TMEM104Q8NE00 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.46■■□□□ 1.03
TMEM104Q8NE00 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
TMEM104Q8NE00 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TMEM104Q8NE00 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM104Q8NE00 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM104Q8NE00 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM104Q8NE00 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TMEM104Q8NE00 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TMEM104Q8NE00 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM104Q8NE00 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.44■■□□□ 1.02
TMEM104Q8NE00 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM104Q8NE00 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM104Q8NE00 LINC00273-201ENST00000539813 1452 ntBASIC21.43■■□□□ 1.02
TMEM104Q8NE00 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TMEM104Q8NE00 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM104Q8NE00 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM104Q8NE00 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM104Q8NE00 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.42■■□□□ 1.02
TMEM104Q8NE00 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM104Q8NE00 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM104Q8NE00 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.41■■□□□ 1.02
TMEM104Q8NE00 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TMEM104Q8NE00 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM104Q8NE00 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
TMEM104Q8NE00 AC091060.1-201ENST00000623524 1766 ntBASIC21.41■■□□□ 1.02
TMEM104Q8NE00 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TMEM104Q8NE00 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM104Q8NE00 DUX4L28-201ENST00000623687 678 ntBASIC21.4■■□□□ 1.02
TMEM104Q8NE00 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TMEM104Q8NE00 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM104Q8NE00 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM104Q8NE00 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM104Q8NE00 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM104Q8NE00 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM104Q8NE00 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM104Q8NE00 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TMEM104Q8NE00 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM104Q8NE00 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM104Q8NE00 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM104Q8NE00 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.37■■□□□ 1.01
TMEM104Q8NE00 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM104Q8NE00 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM104Q8NE00 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM104Q8NE00 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.37■■□□□ 1.01
TMEM104Q8NE00 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM104Q8NE00 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
TMEM104Q8NE00 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM104Q8NE00 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM104Q8NE00 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM104Q8NE00 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM104Q8NE00 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM104Q8NE00 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM104Q8NE00 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM104Q8NE00 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM104Q8NE00 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM104Q8NE00 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM104Q8NE00 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM104Q8NE00 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.34■■□□□ 1.01
TMEM104Q8NE00 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.34■■□□□ 1.01
TMEM104Q8NE00 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM104Q8NE00 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
TMEM104Q8NE00 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.33■■□□□ 1.01
TMEM104Q8NE00 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM104Q8NE00 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.33■■□□□ 1.01
TMEM104Q8NE00 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM104Q8NE00 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM104Q8NE00 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM104Q8NE00 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.32■■□□□ 1
TMEM104Q8NE00 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM104Q8NE00 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM104Q8NE00 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM104Q8NE00 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.31■■□□□ 1
TMEM104Q8NE00 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.3■■□□□ 1
TMEM104Q8NE00 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM104Q8NE00 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
TMEM104Q8NE00 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TMEM104Q8NE00 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms