Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 DUX4L21-201ENST00000622058 1269 ntBASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 DUX4L10-201ENST00000622460 1267 ntBASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 DUX4L25-201ENST00000624915 1269 ntBASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SIMC1Q8NDZ2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.62■■□□□ 1.37
SIMC1Q8NDZ2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
SIMC1Q8NDZ2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.62■■□□□ 1.37
SIMC1Q8NDZ2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SIMC1Q8NDZ2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SIMC1Q8NDZ2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.61■■□□□ 1.37
SIMC1Q8NDZ2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.61■■□□□ 1.37
SIMC1Q8NDZ2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.61■■□□□ 1.37
SIMC1Q8NDZ2 MIR7108-201ENST00000614319 87 ntBASIC23.61■■□□□ 1.37
SIMC1Q8NDZ2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.61■■□□□ 1.37
SIMC1Q8NDZ2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.6■■□□□ 1.37
SIMC1Q8NDZ2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIMC1Q8NDZ2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIMC1Q8NDZ2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SIMC1Q8NDZ2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIMC1Q8NDZ2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIMC1Q8NDZ2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SIMC1Q8NDZ2 LINC01003-201ENST00000564834 1764 ntBASIC23.58■■□□□ 1.37
SIMC1Q8NDZ2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SIMC1Q8NDZ2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.58■■□□□ 1.37
SIMC1Q8NDZ2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SIMC1Q8NDZ2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SIMC1Q8NDZ2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SIMC1Q8NDZ2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.57■■□□□ 1.36
SIMC1Q8NDZ2 CR559946.2-201ENST00000623684 991 ntBASIC23.57■■□□□ 1.36
SIMC1Q8NDZ2 BX255925.1-201ENST00000566954 1854 ntBASIC23.56■■□□□ 1.36
SIMC1Q8NDZ2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SIMC1Q8NDZ2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SIMC1Q8NDZ2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SIMC1Q8NDZ2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SIMC1Q8NDZ2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIMC1Q8NDZ2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIMC1Q8NDZ2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.55■■□□□ 1.36
SIMC1Q8NDZ2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
SIMC1Q8NDZ2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIMC1Q8NDZ2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIMC1Q8NDZ2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SIMC1Q8NDZ2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.54■■□□□ 1.36
SIMC1Q8NDZ2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SIMC1Q8NDZ2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.54■■□□□ 1.36
SIMC1Q8NDZ2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIMC1Q8NDZ2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIMC1Q8NDZ2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIMC1Q8NDZ2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.53■■□□□ 1.36
SIMC1Q8NDZ2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIMC1Q8NDZ2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIMC1Q8NDZ2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIMC1Q8NDZ2 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.52■■□□□ 1.36
SIMC1Q8NDZ2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIMC1Q8NDZ2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SIMC1Q8NDZ2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 AC018358.1-201ENST00000631079 1402 ntBASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 MIR3648-2-201ENST00000581792 180 ntBASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 MIR3648-1-201ENST00000615959 180 ntBASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SIMC1Q8NDZ2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SIMC1Q8NDZ2 AC016575.1-201ENST00000607026 382 ntBASIC23.49■■□□□ 1.35
SIMC1Q8NDZ2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SIMC1Q8NDZ2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.48■■□□□ 1.35
SIMC1Q8NDZ2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SIMC1Q8NDZ2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
SIMC1Q8NDZ2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SIMC1Q8NDZ2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
SIMC1Q8NDZ2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SIMC1Q8NDZ2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SIMC1Q8NDZ2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SIMC1Q8NDZ2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SIMC1Q8NDZ2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.46■■□□□ 1.35
SIMC1Q8NDZ2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SIMC1Q8NDZ2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SIMC1Q8NDZ2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SIMC1Q8NDZ2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
SIMC1Q8NDZ2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.45■■□□□ 1.34
SIMC1Q8NDZ2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.45■■□□□ 1.34
SIMC1Q8NDZ2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SIMC1Q8NDZ2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SIMC1Q8NDZ2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.44■■□□□ 1.34
SIMC1Q8NDZ2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SIMC1Q8NDZ2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 HLA-V-202ENST00000446817 847 ntBASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms