Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.79■■□□□ 1.72
SYNPOQ8N3V7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SYNPOQ8N3V7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.78■■□□□ 1.72
SYNPOQ8N3V7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SYNPOQ8N3V7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.78■■□□□ 1.72
SYNPOQ8N3V7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SYNPOQ8N3V7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SYNPOQ8N3V7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SYNPOQ8N3V7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SYNPOQ8N3V7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
SYNPOQ8N3V7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
SYNPOQ8N3V7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SYNPOQ8N3V7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.76■■□□□ 1.71
SYNPOQ8N3V7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SYNPOQ8N3V7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SYNPOQ8N3V7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SYNPOQ8N3V7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SYNPOQ8N3V7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SYNPOQ8N3V7 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.75■■□□□ 1.71
SYNPOQ8N3V7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SYNPOQ8N3V7 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.75■■□□□ 1.71
SYNPOQ8N3V7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SYNPOQ8N3V7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SYNPOQ8N3V7 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.74■■□□□ 1.71
SYNPOQ8N3V7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SYNPOQ8N3V7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.74■■□□□ 1.71
SYNPOQ8N3V7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.74■■□□□ 1.71
SYNPOQ8N3V7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.73■■□□□ 1.71
SYNPOQ8N3V7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.73■■□□□ 1.71
SYNPOQ8N3V7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SYNPOQ8N3V7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
SYNPOQ8N3V7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SYNPOQ8N3V7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SYNPOQ8N3V7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.72■■□□□ 1.71
SYNPOQ8N3V7 AL157400.5-201ENST00000507624 621 ntBASIC25.72■■□□□ 1.71
SYNPOQ8N3V7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SYNPOQ8N3V7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SYNPOQ8N3V7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SYNPOQ8N3V7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.71■■□□□ 1.71
SYNPOQ8N3V7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.71■■□□□ 1.71
SYNPOQ8N3V7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.71■■□□□ 1.71
SYNPOQ8N3V7 AC007029.1-201ENST00000604183 313 ntBASIC25.71■■□□□ 1.71
SYNPOQ8N3V7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SYNPOQ8N3V7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SYNPOQ8N3V7 RARRES2P1-201ENST00000474487 481 ntBASIC25.7■■□□□ 1.7
SYNPOQ8N3V7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.7■■□□□ 1.7
SYNPOQ8N3V7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SYNPOQ8N3V7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SYNPOQ8N3V7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.69■■□□□ 1.7
SYNPOQ8N3V7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SYNPOQ8N3V7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SYNPOQ8N3V7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SYNPOQ8N3V7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SYNPOQ8N3V7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SYNPOQ8N3V7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SYNPOQ8N3V7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SYNPOQ8N3V7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SYNPOQ8N3V7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SYNPOQ8N3V7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.66■■□□□ 1.7
SYNPOQ8N3V7 AC129492.7-201ENST00000622992 756 ntBASIC25.66■■□□□ 1.7
SYNPOQ8N3V7 AP004833.2-201ENST00000532228 1454 ntBASIC25.66■■□□□ 1.7
SYNPOQ8N3V7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
SYNPOQ8N3V7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SYNPOQ8N3V7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
SYNPOQ8N3V7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SYNPOQ8N3V7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SYNPOQ8N3V7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
SYNPOQ8N3V7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.64■■□□□ 1.7
SYNPOQ8N3V7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.64■■□□□ 1.7
SYNPOQ8N3V7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.64■■□□□ 1.69
SYNPOQ8N3V7 ABCB10P1-201ENST00000614297 2181 ntBASIC25.63■■□□□ 1.69
SYNPOQ8N3V7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
SYNPOQ8N3V7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.63■■□□□ 1.69
SYNPOQ8N3V7 AC133552.2-201ENST00000619106 1032 ntBASIC25.63■■□□□ 1.69
SYNPOQ8N3V7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.63■■□□□ 1.69
SYNPOQ8N3V7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.63■■□□□ 1.69
SYNPOQ8N3V7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SYNPOQ8N3V7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SYNPOQ8N3V7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SYNPOQ8N3V7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SYNPOQ8N3V7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
SYNPOQ8N3V7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SYNPOQ8N3V7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.61■■□□□ 1.69
SYNPOQ8N3V7 SMPD5-203ENST00000639008 1464 ntBASIC25.6■■□□□ 1.69
SYNPOQ8N3V7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SYNPOQ8N3V7 AL592293.1-201ENST00000502889 1188 ntBASIC25.6■■□□□ 1.69
SYNPOQ8N3V7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SYNPOQ8N3V7 AC009831.1-201ENST00000580420 1582 ntBASIC25.6■■□□□ 1.69
SYNPOQ8N3V7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYNPOQ8N3V7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.59■■□□□ 1.69
SYNPOQ8N3V7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
SYNPOQ8N3V7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYNPOQ8N3V7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYNPOQ8N3V7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SYNPOQ8N3V7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
SYNPOQ8N3V7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SYNPOQ8N3V7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.57■■□□□ 1.68
SYNPOQ8N3V7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
SYNPOQ8N3V7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.57■■□□□ 1.68
SYNPOQ8N3V7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms