Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.81■■■□□ 2.68
SYNE4Q8N205 AC092296.2-201ENST00000589470 999 ntBASIC31.81■■■□□ 2.68
SYNE4Q8N205 AC018358.1-201ENST00000631079 1402 ntBASIC31.81■■■□□ 2.68
SYNE4Q8N205 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SYNE4Q8N205 AP004833.2-201ENST00000532228 1454 ntBASIC31.79■■■□□ 2.68
SYNE4Q8N205 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.79■■■□□ 2.68
SYNE4Q8N205 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
SYNE4Q8N205 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.78■■■□□ 2.68
SYNE4Q8N205 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.78■■■□□ 2.68
SYNE4Q8N205 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.78■■■□□ 2.68
SYNE4Q8N205 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.77■■■□□ 2.68
SYNE4Q8N205 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
SYNE4Q8N205 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
SYNE4Q8N205 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SYNE4Q8N205 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SYNE4Q8N205 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.73■■■□□ 2.67
SYNE4Q8N205 AL139393.2-201ENST00000608721 2025 ntBASIC31.73■■■□□ 2.67
SYNE4Q8N205 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SYNE4Q8N205 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SYNE4Q8N205 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.72■■■□□ 2.67
SYNE4Q8N205 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.71■■■□□ 2.67
SYNE4Q8N205 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SYNE4Q8N205 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
SYNE4Q8N205 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.69■■■□□ 2.66
SYNE4Q8N205 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.69■■■□□ 2.66
SYNE4Q8N205 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.69■■■□□ 2.66
SYNE4Q8N205 ABCB10P1-201ENST00000614297 2181 ntBASIC31.69■■■□□ 2.66
SYNE4Q8N205 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.69■■■□□ 2.66
SYNE4Q8N205 AL157400.5-201ENST00000507624 621 ntBASIC31.69■■■□□ 2.66
SYNE4Q8N205 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
SYNE4Q8N205 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SYNE4Q8N205 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SYNE4Q8N205 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.68■■■□□ 2.66
SYNE4Q8N205 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.68■■■□□ 2.66
SYNE4Q8N205 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.68■■■□□ 2.66
SYNE4Q8N205 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SYNE4Q8N205 ABCB10P3-201ENST00000561950 2166 ntBASIC31.67■■■□□ 2.66
SYNE4Q8N205 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.67■■■□□ 2.66
SYNE4Q8N205 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
SYNE4Q8N205 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SYNE4Q8N205 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.65■■■□□ 2.66
SYNE4Q8N205 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.65■■■□□ 2.66
SYNE4Q8N205 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SYNE4Q8N205 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SYNE4Q8N205 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
SYNE4Q8N205 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SYNE4Q8N205 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SYNE4Q8N205 ECEL1P2-201ENST00000461596 1295 ntBASIC31.64■■■□□ 2.66
SYNE4Q8N205 KRT18P60-201ENST00000312876 1297 ntBASIC31.63■■■□□ 2.65
SYNE4Q8N205 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.63■■■□□ 2.65
SYNE4Q8N205 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SYNE4Q8N205 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.62■■■□□ 2.65
SYNE4Q8N205 AC004987.1-201ENST00000428627 508 ntBASIC31.62■■■□□ 2.65
SYNE4Q8N205 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.62■■■□□ 2.65
SYNE4Q8N205 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SYNE4Q8N205 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
SYNE4Q8N205 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SYNE4Q8N205 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
SYNE4Q8N205 TSPY13P-201ENST00000338964 914 ntBASIC31.61■■■□□ 2.65
SYNE4Q8N205 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.61■■■□□ 2.65
SYNE4Q8N205 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.6■■■□□ 2.65
SYNE4Q8N205 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
SYNE4Q8N205 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
SYNE4Q8N205 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SYNE4Q8N205 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SYNE4Q8N205 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SYNE4Q8N205 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
SYNE4Q8N205 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.58■■■□□ 2.65
SYNE4Q8N205 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
SYNE4Q8N205 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SYNE4Q8N205 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.58■■■□□ 2.65
SYNE4Q8N205 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.58■■■□□ 2.65
SYNE4Q8N205 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
SYNE4Q8N205 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SYNE4Q8N205 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.57■■■□□ 2.64
SYNE4Q8N205 ATP5G2P3-201ENST00000429083 425 ntBASIC31.57■■■□□ 2.64
SYNE4Q8N205 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SYNE4Q8N205 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SYNE4Q8N205 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SYNE4Q8N205 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SYNE4Q8N205 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.55■■■□□ 2.64
SYNE4Q8N205 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SYNE4Q8N205 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SYNE4Q8N205 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.54■■■□□ 2.64
SYNE4Q8N205 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SYNE4Q8N205 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.54■■■□□ 2.64
SYNE4Q8N205 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SYNE4Q8N205 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.53■■■□□ 2.64
SYNE4Q8N205 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SYNE4Q8N205 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
SYNE4Q8N205 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
SYNE4Q8N205 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.52■■■□□ 2.64
SYNE4Q8N205 RARRES2P1-201ENST00000474487 481 ntBASIC31.52■■■□□ 2.64
SYNE4Q8N205 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.52■■■□□ 2.64
SYNE4Q8N205 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
SYNE4Q8N205 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
SYNE4Q8N205 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SYNE4Q8N205 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
SYNE4Q8N205 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.51■■■□□ 2.63
SYNE4Q8N205 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms