Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RPLP0P05388 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
RPLP0P05388 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
RPLP0P05388 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPLP0P05388 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.57■■□□□ 1.52
RPLP0P05388 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.57■■□□□ 1.52
RPLP0P05388 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.56■■□□□ 1.52
RPLP0P05388 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPLP0P05388 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RPLP0P05388 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPLP0P05388 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.56■■□□□ 1.52
RPLP0P05388 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RPLP0P05388 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPLP0P05388 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RPLP0P05388 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RPLP0P05388 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RPLP0P05388 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPLP0P05388 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPLP0P05388 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPLP0P05388 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RPLP0P05388 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPLP0P05388 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.54■■□□□ 1.52
RPLP0P05388 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPLP0P05388 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPLP0P05388 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.53■■□□□ 1.52
RPLP0P05388 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RPLP0P05388 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPLP0P05388 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
RPLP0P05388 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.52■■□□□ 1.52
RPLP0P05388 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPLP0P05388 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPLP0P05388 ST7-AS1-201ENST00000456775 1889 ntBASIC24.51■■□□□ 1.51
RPLP0P05388 AC012354.3-201ENST00000623734 483 ntBASIC24.51■■□□□ 1.51
RPLP0P05388 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
RPLP0P05388 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RPLP0P05388 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPLP0P05388 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RPLP0P05388 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RPLP0P05388 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPLP0P05388 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPLP0P05388 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPLP0P05388 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
RPLP0P05388 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPLP0P05388 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RPLP0P05388 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RPLP0P05388 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RPLP0P05388 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
RPLP0P05388 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.47■■□□□ 1.51
RPLP0P05388 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RPLP0P05388 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RPLP0P05388 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RPLP0P05388 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.46■■□□□ 1.51
RPLP0P05388 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.46■■□□□ 1.51
RPLP0P05388 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.46■■□□□ 1.51
RPLP0P05388 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.46■■□□□ 1.51
RPLP0P05388 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RPLP0P05388 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.46■■□□□ 1.51
RPLP0P05388 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RPLP0P05388 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RPLP0P05388 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.45■■□□□ 1.5
RPLP0P05388 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.44■■□□□ 1.5
RPLP0P05388 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RPLP0P05388 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RPLP0P05388 AC126177.7-201ENST00000547904 679 ntBASIC24.44■■□□□ 1.5
RPLP0P05388 AC092296.2-201ENST00000589470 999 ntBASIC24.44■■□□□ 1.5
RPLP0P05388 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RPLP0P05388 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.44■■□□□ 1.5
RPLP0P05388 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RPLP0P05388 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RPLP0P05388 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.43■■□□□ 1.5
RPLP0P05388 U85056.1-201ENST00000616429 682 ntBASIC24.43■■□□□ 1.5
RPLP0P05388 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RPLP0P05388 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RPLP0P05388 AP004833.2-201ENST00000532228 1454 ntBASIC24.43■■□□□ 1.5
RPLP0P05388 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RPLP0P05388 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.42■■□□□ 1.5
RPLP0P05388 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RPLP0P05388 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RPLP0P05388 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RPLP0P05388 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RPLP0P05388 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RPLP0P05388 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.39■■□□□ 1.49
RPLP0P05388 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RPLP0P05388 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.39■■□□□ 1.49
RPLP0P05388 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RPLP0P05388 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPLP0P05388 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RPLP0P05388 AC100797.4-201ENST00000631653 1827 ntBASIC24.38■■□□□ 1.49
RPLP0P05388 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPLP0P05388 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RPLP0P05388 ECEL1P2-201ENST00000461596 1295 ntBASIC24.38■■□□□ 1.49
RPLP0P05388 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
RPLP0P05388 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPLP0P05388 AL033527.3-201ENST00000566366 1196 ntBASIC24.37■■□□□ 1.49
RPLP0P05388 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPLP0P05388 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPLP0P05388 AC018358.1-201ENST00000631079 1402 ntBASIC24.36■■□□□ 1.49
RPLP0P05388 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPLP0P05388 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPLP0P05388 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms