Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
KCNAB3O43448 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNAB3O43448 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.07■□□□□ 0.96
KCNAB3O43448 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNAB3O43448 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.07■□□□□ 0.96
KCNAB3O43448 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNAB3O43448 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNAB3O43448 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.06■□□□□ 0.96
KCNAB3O43448 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KCNAB3O43448 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNAB3O43448 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNAB3O43448 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.05■□□□□ 0.96
KCNAB3O43448 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.05■□□□□ 0.96
KCNAB3O43448 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
KCNAB3O43448 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.05■□□□□ 0.96
KCNAB3O43448 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.04■□□□□ 0.96
KCNAB3O43448 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KCNAB3O43448 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
KCNAB3O43448 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNAB3O43448 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNAB3O43448 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KCNAB3O43448 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KCNAB3O43448 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNAB3O43448 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KCNAB3O43448 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNAB3O43448 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNAB3O43448 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNAB3O43448 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KCNAB3O43448 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNAB3O43448 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.02■□□□□ 0.96
KCNAB3O43448 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNAB3O43448 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNAB3O43448 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KCNAB3O43448 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
KCNAB3O43448 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
KCNAB3O43448 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.01■□□□□ 0.95
KCNAB3O43448 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNAB3O43448 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNAB3O43448 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
KCNAB3O43448 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNAB3O43448 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.01■□□□□ 0.95
KCNAB3O43448 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNAB3O43448 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KCNAB3O43448 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNAB3O43448 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KCNAB3O43448 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.01■□□□□ 0.95
KCNAB3O43448 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNAB3O43448 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KCNAB3O43448 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNAB3O43448 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
KCNAB3O43448 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.99■□□□□ 0.95
KCNAB3O43448 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KCNAB3O43448 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNAB3O43448 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNAB3O43448 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNAB3O43448 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNAB3O43448 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNAB3O43448 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNAB3O43448 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.98■□□□□ 0.95
KCNAB3O43448 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNAB3O43448 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNAB3O43448 AC016575.1-201ENST00000607026 382 ntBASIC20.97■□□□□ 0.95
KCNAB3O43448 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNAB3O43448 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
KCNAB3O43448 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNAB3O43448 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.96■□□□□ 0.95
KCNAB3O43448 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.96■□□□□ 0.95
KCNAB3O43448 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNAB3O43448 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNAB3O43448 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNAB3O43448 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNAB3O43448 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KCNAB3O43448 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNAB3O43448 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KCNAB3O43448 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNAB3O43448 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNAB3O43448 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
KCNAB3O43448 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNAB3O43448 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNAB3O43448 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNAB3O43448 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNAB3O43448 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
KCNAB3O43448 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNAB3O43448 AC020928.2-201ENST00000588717 2197 ntBASIC20.93■□□□□ 0.94
KCNAB3O43448 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNAB3O43448 AC091060.1-201ENST00000623524 1766 ntBASIC20.93■□□□□ 0.94
KCNAB3O43448 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNAB3O43448 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNAB3O43448 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNAB3O43448 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
KCNAB3O43448 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNAB3O43448 LINC01003-201ENST00000564834 1764 ntBASIC20.92■□□□□ 0.94
KCNAB3O43448 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNAB3O43448 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNAB3O43448 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNAB3O43448 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNAB3O43448 MIR3648-2-201ENST00000581792 180 ntBASIC20.91■□□□□ 0.94
KCNAB3O43448 MIR3648-1-201ENST00000615959 180 ntBASIC20.91■□□□□ 0.94
KCNAB3O43448 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNAB3O43448 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms