Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
FOXN1O15353 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
FOXN1O15353 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
FOXN1O15353 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
FOXN1O15353 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.22■■■□□ 2.43
FOXN1O15353 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
FOXN1O15353 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
FOXN1O15353 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.22■■■□□ 2.43
FOXN1O15353 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
FOXN1O15353 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
FOXN1O15353 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
FOXN1O15353 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
FOXN1O15353 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
FOXN1O15353 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
FOXN1O15353 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.21■■■□□ 2.43
FOXN1O15353 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
FOXN1O15353 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.21■■■□□ 2.43
FOXN1O15353 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.21■■■□□ 2.43
FOXN1O15353 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.21■■■□□ 2.43
FOXN1O15353 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
FOXN1O15353 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.2■■■□□ 2.43
FOXN1O15353 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
FOXN1O15353 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
FOXN1O15353 ABCB10P3-201ENST00000561950 2166 ntBASIC30.19■■■□□ 2.42
FOXN1O15353 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
FOXN1O15353 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
FOXN1O15353 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
FOXN1O15353 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.18■■■□□ 2.42
FOXN1O15353 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
FOXN1O15353 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
FOXN1O15353 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
FOXN1O15353 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
FOXN1O15353 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
FOXN1O15353 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC30.17■■■□□ 2.42
FOXN1O15353 ECEL1P2-201ENST00000461596 1295 ntBASIC30.17■■■□□ 2.42
FOXN1O15353 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.16■■■□□ 2.42
FOXN1O15353 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
FOXN1O15353 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
FOXN1O15353 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.16■■■□□ 2.42
FOXN1O15353 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.16■■■□□ 2.42
FOXN1O15353 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
FOXN1O15353 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
FOXN1O15353 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
FOXN1O15353 AC139426.1-201ENST00000568218 2529 ntBASIC30.15■■■□□ 2.42
FOXN1O15353 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
FOXN1O15353 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
FOXN1O15353 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
FOXN1O15353 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.14■■■□□ 2.42
FOXN1O15353 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
FOXN1O15353 KRT8P33-201ENST00000508125 1423 ntBASIC30.13■■■□□ 2.41
FOXN1O15353 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
FOXN1O15353 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
FOXN1O15353 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.13■■■□□ 2.41
FOXN1O15353 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
FOXN1O15353 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.12■■■□□ 2.41
FOXN1O15353 RP9P-202ENST00000450133 1212 ntBASIC30.12■■■□□ 2.41
FOXN1O15353 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.12■■■□□ 2.41
FOXN1O15353 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.11■■■□□ 2.41
FOXN1O15353 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
FOXN1O15353 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
FOXN1O15353 AL592293.1-201ENST00000502889 1188 ntBASIC30.11■■■□□ 2.41
FOXN1O15353 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
FOXN1O15353 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.11■■■□□ 2.41
FOXN1O15353 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
FOXN1O15353 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
FOXN1O15353 ST7-AS1-201ENST00000456775 1889 ntBASIC30.1■■■□□ 2.41
FOXN1O15353 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.1■■■□□ 2.41
FOXN1O15353 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
FOXN1O15353 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
FOXN1O15353 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
FOXN1O15353 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
FOXN1O15353 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
FOXN1O15353 AL356441.2-201ENST00000443009 864 ntBASIC30.09■■■□□ 2.41
FOXN1O15353 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
FOXN1O15353 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.08■■■□□ 2.41
FOXN1O15353 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
FOXN1O15353 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
FOXN1O15353 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
FOXN1O15353 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
FOXN1O15353 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
FOXN1O15353 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
FOXN1O15353 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
FOXN1O15353 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
FOXN1O15353 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
FOXN1O15353 AC010980.1-201ENST00000587192 1142 ntBASIC30.05■■■□□ 2.4
FOXN1O15353 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
FOXN1O15353 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
FOXN1O15353 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
FOXN1O15353 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.04■■■□□ 2.4
FOXN1O15353 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
FOXN1O15353 AC148477.6-201ENST00000623746 465 ntBASIC30.03■■■□□ 2.4
FOXN1O15353 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
FOXN1O15353 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.03■■■□□ 2.4
FOXN1O15353 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
FOXN1O15353 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.02■■■□□ 2.4
FOXN1O15353 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
FOXN1O15353 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
FOXN1O15353 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.01■■■□□ 2.4
FOXN1O15353 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
FOXN1O15353 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms