Protein–RNA interactions for Protein: O00567

NOP56, Nucleolar protein 56, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56O00567 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.34■■■□□ 2.13
NOP56O00567 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.34■■■□□ 2.13
NOP56O00567 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
NOP56O00567 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
NOP56O00567 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
NOP56O00567 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NOP56O00567 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NOP56O00567 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NOP56O00567 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
NOP56O00567 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.32■■■□□ 2.12
NOP56O00567 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
NOP56O00567 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
NOP56O00567 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NOP56O00567 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
NOP56O00567 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
NOP56O00567 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NOP56O00567 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.28■■■□□ 2.12
NOP56O00567 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.28■■■□□ 2.12
NOP56O00567 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
NOP56O00567 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
NOP56O00567 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NOP56O00567 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
NOP56O00567 AC092296.2-201ENST00000589470 999 ntBASIC28.27■■■□□ 2.12
NOP56O00567 NTF6A-201ENST00000591175 560 ntBASIC28.27■■■□□ 2.12
NOP56O00567 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.27■■■□□ 2.12
NOP56O00567 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
NOP56O00567 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.27■■■□□ 2.12
NOP56O00567 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.27■■■□□ 2.12
NOP56O00567 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
NOP56O00567 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
NOP56O00567 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
NOP56O00567 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
NOP56O00567 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
NOP56O00567 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.25■■■□□ 2.11
NOP56O00567 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
NOP56O00567 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
NOP56O00567 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NOP56O00567 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.24■■■□□ 2.11
NOP56O00567 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NOP56O00567 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.24■■■□□ 2.11
NOP56O00567 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.23■■■□□ 2.11
NOP56O00567 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NOP56O00567 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
NOP56O00567 ECEL1P2-201ENST00000461596 1295 ntBASIC28.22■■■□□ 2.11
NOP56O00567 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NOP56O00567 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.21■■■□□ 2.11
NOP56O00567 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NOP56O00567 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
NOP56O00567 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.2■■■□□ 2.11
NOP56O00567 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
NOP56O00567 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
NOP56O00567 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.2■■■□□ 2.1
NOP56O00567 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.2■■■□□ 2.1
NOP56O00567 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
NOP56O00567 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
NOP56O00567 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
NOP56O00567 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NOP56O00567 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NOP56O00567 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
NOP56O00567 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.18■■■□□ 2.1
NOP56O00567 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NOP56O00567 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
NOP56O00567 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
NOP56O00567 AP002414.2-202ENST00000590929 1450 ntBASIC28.17■■■□□ 2.1
NOP56O00567 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
NOP56O00567 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.16■■■□□ 2.1
NOP56O00567 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.16■■■□□ 2.1
NOP56O00567 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
NOP56O00567 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
NOP56O00567 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
NOP56O00567 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.15■■■□□ 2.1
NOP56O00567 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
NOP56O00567 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.15■■■□□ 2.1
NOP56O00567 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.15■■■□□ 2.1
NOP56O00567 AL359258.2-201ENST00000564063 1566 ntBASIC28.15■■■□□ 2.1
NOP56O00567 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NOP56O00567 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NOP56O00567 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.14■■■□□ 2.1
NOP56O00567 AL157400.5-201ENST00000507624 621 ntBASIC28.14■■■□□ 2.1
NOP56O00567 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NOP56O00567 AC012354.3-201ENST00000623734 483 ntBASIC28.14■■■□□ 2.1
NOP56O00567 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
NOP56O00567 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
NOP56O00567 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.13■■■□□ 2.09
NOP56O00567 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
NOP56O00567 U85056.1-201ENST00000616429 682 ntBASIC28.13■■■□□ 2.09
NOP56O00567 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
NOP56O00567 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.13■■■□□ 2.09
NOP56O00567 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.12■■■□□ 2.09
NOP56O00567 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
NOP56O00567 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.12■■■□□ 2.09
NOP56O00567 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
NOP56O00567 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
NOP56O00567 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
NOP56O00567 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.11■■■□□ 2.09
NOP56O00567 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
NOP56O00567 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.1■■■□□ 2.09
NOP56O00567 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.1■■■□□ 2.09
NOP56O00567 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NOP56O00567 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms