RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W DRS1P32892 752 aaKnown RBP8.33□□□□□ -1.08
CHL1YPL008W MTC1P47018 478 aaKnown RBP7.72□□□□□ -1.17
CHL1YPL008W TFA1P36100 482 aa7.59□□□□□ -1.2
CHL1YPL008W BFR2Q06631 534 aaKnown RBP7.43□□□□□ -1.22
CHL1YPL008W AVT3P36062 692 aa7.16□□□□□ -1.26
CHL1YPL008W SGS1P35187 1447 aa6.96□□□□□ -1.3
CHL1YPL008W DIP2Q12220 943 aaPredicted RBP6.91□□□□□ -1.3
CHL1YPL008W INO80P53115 1489 aa6.91□□□□□ -1.3
CHL1YPL008W SPA2P23201 1466 aaKnown RBP6.76□□□□□ -1.33
CHL1YPL008W TCB3Q03640 1545 aaKnown RBP6.76□□□□□ -1.33
CHL1YPL008W SSN2P38931 1420 aa6.65□□□□□ -1.34
CHL1YPL008W RQC2Q12532 1038 aaKnown RBP6.6□□□□□ -1.35
CHL1YPL008W TY1B-DR4Q07793 1604 aa6.59□□□□□ -1.35
CHL1YPL008W MON2P48563 1636 aaPredicted RBP6.53□□□□□ -1.36
CHL1YPL008W TAF7Q05021 590 aa6.5□□□□□ -1.37
CHL1YPL008W DMA1P38823 416 aa6.49□□□□□ -1.37
CHL1YPL008W HSL1P34244 1518 aa6.47□□□□□ -1.37
CHL1YPL008W SPT6P23615 1451 aaKnown RBP6.47□□□□□ -1.37
CHL1YPL008W SWR1Q05471 1514 aa6.41□□□□□ -1.38
CHL1YPL008W HIR3P47171 1648 aa6.36□□□□□ -1.39
CHL1YPL008W XRN1P22147 1528 aaKnown RBP6.32□□□□□ -1.4
CHL1YPL008W SIN3P22579 1536 aa6.27□□□□□ -1.41
CHL1YPL008W REV3P14284 1504 aa6.26□□□□□ -1.41
CHL1YPL008W THO2P53552 1597 aaKnown RBP6.26□□□□□ -1.41
CHL1YPL008W KOG1P38873 1557 aa6.24□□□□□ -1.41
CHL1YPL008W RSE1Q04693 1361 aaKnown RBP6.23□□□□□ -1.41
CHL1YPL008W SSK2P53599 1579 aa6.2□□□□□ -1.42
CHL1YPL008W DNA2P38859 1522 aa6.18□□□□□ -1.42
CHL1YPL008W LEO1P38439 464 aa6.17□□□□□ -1.42
CHL1YPL008W MYO2P19524 1574 aaKnown RBP6.17□□□□□ -1.42
CHL1YPL008W BUD4P47136 1447 aa6.16□□□□□ -1.42
CHL1YPL008W TAF2P23255 1407 aa6.15□□□□□ -1.42
CHL1YPL008W PTP3P40048 928 aa6.13□□□□□ -1.43
CHL1YPL008W ESP1Q03018 1630 aa6.12□□□□□ -1.43
CHL1YPL008W CHD1P32657 1468 aa6.12□□□□□ -1.43
CHL1YPL008W SKI3P17883 1432 aaKnown RBP6.1□□□□□ -1.43
CHL1YPL008W ECM5Q03214 1411 aa6.08□□□□□ -1.44
CHL1YPL008W YPK9Q12697 1472 aa6.08□□□□□ -1.44
CHL1YPL008W SPT21P35209 758 aa6.08□□□□□ -1.44
CHL1YPL008W ATG2P53855 1592 aa6.07□□□□□ -1.44
CHL1YPL008W POL1P13382 1468 aa6.06□□□□□ -1.44
CHL1YPL008W RIM101P33400 625 aa6.05□□□□□ -1.44
CHL1YPL008W YTA7P40340 1379 aa6.05□□□□□ -1.44
CHL1YPL008W ABP1P15891 592 aaKnown RBP6.04□□□□□ -1.44
CHL1YPL008W SAS10Q12136 610 aaPredicted RBP6.03□□□□□ -1.44
CHL1YPL008W MDS3P53094 1487 aa6.02□□□□□ -1.45
CHL1YPL008W PEP1P32319 1579 aa6.02□□□□□ -1.45
CHL1YPL008W MMS22Q06164 1454 aa6.01□□□□□ -1.45
CHL1YPL008W STU1P38198 1513 aa6.01□□□□□ -1.45
CHL1YPL008W RPL17AP05740 184 aaKnown RBP6□□□□□ -1.45
CHL1YPL008W RPL17BP46990 184 aaKnown RBP6□□□□□ -1.45
CHL1YPL008W RPG1P38249 964 aaKnown RBP5.99□□□□□ -1.45
CHL1YPL008W RPO31P04051 1460 aa5.98□□□□□ -1.45
CHL1YPL008W SCC2Q04002 1493 aa5.98□□□□□ -1.45
CHL1YPL008W MYO4P32492 1471 aa5.97□□□□□ -1.45
CHL1YPL008W YOR1P53049 1477 aa5.97□□□□□ -1.45
CHL1YPL008W OXP1P28273 1286 aa5.96□□□□□ -1.46
CHL1YPL008W SMC4Q12267 1418 aa5.96□□□□□ -1.46
CHL1YPL008W RKR1Q04781 1562 aa5.96□□□□□ -1.46
CHL1YPL008W TOP2P06786 1428 aaKnown RBP5.95□□□□□ -1.46
CHL1YPL008W LEU3P08638 886 aa5.95□□□□□ -1.46
CHL1YPL008W SSP1P38871 571 aa5.95□□□□□ -1.46
CHL1YPL008W ISW2Q08773 1120 aa5.95□□□□□ -1.46
CHL1YPL008W UFD4P33202 1483 aa5.91□□□□□ -1.46
CHL1YPL008W YCF1P39109 1515 aaKnown RBP5.91□□□□□ -1.46
CHL1YPL008W PRI1P10363 409 aa5.88□□□□□ -1.47
CHL1YPL008W YLR271WQ06152 274 aa5.87□□□□□ -1.47
CHL1YPL008W BPT1P14772 1559 aa5.87□□□□□ -1.47
CHL1YPL008W SNQ2P32568 1501 aaKnown RBP5.82□□□□□ -1.48
CHL1YPL008W STH1P32597 1359 aa5.82□□□□□ -1.48
CHL1YPL008W DMA2P53924 522 aa5.81□□□□□ -1.48
CHL1YPL008W TY2B-LR1P0C2J3 1770 aa5.81□□□□□ -1.48
CHL1YPL008W TY2B-FP0CX63 1770 aa5.81□□□□□ -1.48
CHL1YPL008W TY2B-GR2P0CX64 1770 aa5.81□□□□□ -1.48
CHL1YPL008W TY2B-CP25384 1770 aa5.81□□□□□ -1.48
CHL1YPL008W TY2B-DR2Q03494 1770 aa5.81□□□□□ -1.48
CHL1YPL008W TY1B-DR1Q03855 1755 aa5.81□□□□□ -1.48
CHL1YPL008W TY2B-DR3Q07791 1770 aaKnown RBP5.81□□□□□ -1.48
CHL1YPL008W TY2B-OR1Q12113 1770 aa5.81□□□□□ -1.48
CHL1YPL008W TY2B-DR1Q12472 1770 aa5.81□□□□□ -1.48
CHL1YPL008W TY2B-OR2Q12501 1770 aa5.81□□□□□ -1.48
CHL1YPL008W SPP41P38904 1435 aa5.8□□□□□ -1.48
CHL1YPL008W TY1B-DR3Q99231 1755 aa5.79□□□□□ -1.48
CHL1YPL008W IKI3Q06706 1349 aaKnown RBP5.79□□□□□ -1.48
CHL1YPL008W TY2B-BQ12491 1770 aa5.77□□□□□ -1.49
CHL1YPL008W TSC11P40061 1430 aa5.76□□□□□ -1.49
CHL1YPL008W CDC25P04821 1589 aa5.76□□□□□ -1.49
CHL1YPL008W TRM732Q03496 1420 aa5.76□□□□□ -1.49
CHL1YPL008W CST9Q06032 482 aa5.76□□□□□ -1.49
CHL1YPL008W REB1P21538 810 aa5.75□□□□□ -1.49
CHL1YPL008W PAN1P32521 1480 aa5.75□□□□□ -1.49
CHL1YPL008W MLP2P40457 1679 aa5.75□□□□□ -1.49
CHL1YPL008W VTH1P40438 1549 aa5.75□□□□□ -1.49
CHL1YPL008W VTH2P40890 1549 aa5.75□□□□□ -1.49
CHL1YPL008W YAH1Q12184 172 aaKnown RBP5.74□□□□□ -1.49
CHL1YPL008W TY1B-HO13535 1793 aa5.74□□□□□ -1.49
CHL1YPL008W TY1B-DR5P0C2I2 1755 aa5.74□□□□□ -1.49
CHL1YPL008W TY1B-DR6P0C2I3 1755 aa5.74□□□□□ -1.49
CHL1YPL008W TY1B-LR2P0C2I5 1755 aa5.74□□□□□ -1.49
CHL1YPL008W TY1B-LR3P0C2I6 1755 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms