RNA–Protein interactions for RNA: YOL072W

THP1, Transcript of Nuclear pore-associated protein, yeastyeast

Gene THP1, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
THP1YOL072W MTC1P47018 478 aaKnown RBP12.42□□□□□ -0.42
THP1YOL072W FAP1P53971 965 aa12.3□□□□□ -0.44
THP1YOL072W PRY3P47033 881 aa11.57□□□□□ -0.56
THP1YOL072W AAD16Q02895 342 aa11.09□□□□□ -0.63
THP1YOL072W PRI1P10363 409 aa11□□□□□ -0.65
THP1YOL072W HAA1Q12753 694 aaKnown RBP10.85□□□□□ -0.67
THP1YOL072W YCK3P39962 524 aa10.75□□□□□ -0.69
THP1YOL072W DRS1P32892 752 aaKnown RBP10.66□□□□□ -0.7
THP1YOL072W ISW2Q08773 1120 aa10.57□□□□□ -0.72
THP1YOL072W RPG1P38249 964 aaKnown RBP10.43□□□□□ -0.74
THP1YOL072W TSR3Q12094 313 aaKnown RBP10.33□□□□□ -0.76
THP1YOL072W MRPL32P25348 183 aa10.01□□□□□ -0.81
THP1YOL072W YGL015CP33199 130 aa9.88□□□□□ -0.83
THP1YOL072W DIP2Q12220 943 aaPredicted RBP9.68□□□□□ -0.86
THP1YOL072W RSE1Q04693 1361 aaKnown RBP9.66□□□□□ -0.86
THP1YOL072W REB1P21538 810 aa9.49□□□□□ -0.89
THP1YOL072W BUD31P25337 157 aaPredicted RBP9.42□□□□□ -0.9
THP1YOL072W RPL17AP05740 184 aaKnown RBP9.38□□□□□ -0.91
THP1YOL072W RPL17BP46990 184 aaKnown RBP9.38□□□□□ -0.91
THP1YOL072W CDC27P38042 758 aa9.23□□□□□ -0.93
THP1YOL072W UBP10P53874 792 aaPredicted RBP9.18□□□□□ -0.94
THP1YOL072W MAP2P38174 421 aaKnown RBP9.09□□□□□ -0.95
THP1YOL072W SGS1P35187 1447 aa9.05□□□□□ -0.96
THP1YOL072W AVT3P36062 692 aa9.02□□□□□ -0.97
THP1YOL072W BFR2Q06631 534 aaKnown RBP9.02□□□□□ -0.97
THP1YOL072W YKR023WP36119 530 aaKnown RBP8.99□□□□□ -0.97
THP1YOL072W SIS1P25294 352 aaKnown RBP8.94□□□□□ -0.98
THP1YOL072W UBP9P39967 754 aa8.88□□□□□ -0.99
THP1YOL072W TIF4632P39936 914 aaKnown RBP8.86□□□□□ -0.99
THP1YOL072W SPT21P35209 758 aa8.86□□□□□ -0.99
THP1YOL072W INO80P53115 1489 aa8.85□□□□□ -0.99
THP1YOL072W TFC8Q12308 588 aa8.83□□□□□ -1
THP1YOL072W HOP09932 586 aa8.82□□□□□ -1
THP1YOL072W TGL3P40308 642 aa8.8□□□□□ -1
THP1YOL072W TCB3Q03640 1545 aaKnown RBP8.78□□□□□ -1
THP1YOL072W DCD1P06773 312 aa8.77□□□□□ -1.01
THP1YOL072W SCY1P53009 804 aa8.75□□□□□ -1.01
THP1YOL072W SLX5P32828 619 aaKnown RBP8.73□□□□□ -1.01
THP1YOL072W MON2P48563 1636 aaPredicted RBP8.7□□□□□ -1.02
THP1YOL072W TY1B-DR4Q07793 1604 aa8.67□□□□□ -1.02
THP1YOL072W SSN2P38931 1420 aa8.6□□□□□ -1.03
THP1YOL072W SPA2P23201 1466 aaKnown RBP8.58□□□□□ -1.04
THP1YOL072W SWR1Q05471 1514 aa8.52□□□□□ -1.05
THP1YOL072W HSL1P34244 1518 aa8.5□□□□□ -1.05
THP1YOL072W TFA1P36100 482 aa8.5□□□□□ -1.05
THP1YOL072W SPT6P23615 1451 aaKnown RBP8.5□□□□□ -1.05
THP1YOL072W BCH2P36122 765 aa8.48□□□□□ -1.05
THP1YOL072W RIM101P33400 625 aa8.36□□□□□ -1.07
THP1YOL072W HIR3P47171 1648 aa8.35□□□□□ -1.07
THP1YOL072W DNA2P38859 1522 aa8.33□□□□□ -1.08
THP1YOL072W XRN1P22147 1528 aaKnown RBP8.31□□□□□ -1.08
THP1YOL072W YBL029C-AQ3E756 94 aa8.29□□□□□ -1.08
THP1YOL072W MST1P07236 462 aa8.28□□□□□ -1.08
THP1YOL072W KOG1P38873 1557 aa8.26□□□□□ -1.09
THP1YOL072W YOR238WQ08634 303 aa8.25□□□□□ -1.09
THP1YOL072W EPS1P40557 701 aa8.22□□□□□ -1.09
THP1YOL072W BDF1P35817 686 aa8.21□□□□□ -1.1
THP1YOL072W REV3P14284 1504 aa8.18□□□□□ -1.1
THP1YOL072W VNX1P42839 908 aa8.18□□□□□ -1.1
THP1YOL072W SPP1Q03012 353 aa8.14□□□□□ -1.11
THP1YOL072W TAF2P23255 1407 aa8.14□□□□□ -1.11
THP1YOL072W NSR1P27476 414 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
THP1YOL072W BUD4P47136 1447 aa8.1□□□□□ -1.11
THP1YOL072W ECM5Q03214 1411 aa8.1□□□□□ -1.11
THP1YOL072W YJL171CP46992 396 aa8.1□□□□□ -1.11
THP1YOL072W SIN3P22579 1536 aa8.09□□□□□ -1.12
THP1YOL072W THO2P53552 1597 aaKnown RBP8.08□□□□□ -1.12
THP1YOL072W YAP5P40574 245 aa8.06□□□□□ -1.12
THP1YOL072W SSK2P53599 1579 aa8.05□□□□□ -1.12
THP1YOL072W WSC3Q12215 556 aa8.04□□□□□ -1.12
THP1YOL072W PTP3P40048 928 aa8.03□□□□□ -1.12
THP1YOL072W YIL055CP40523 627 aaKnown RBP8.03□□□□□ -1.12
THP1YOL072W OXP1P28273 1286 aa8.02□□□□□ -1.13
THP1YOL072W AIR2Q12476 344 aaKnown RBP8.01□□□□□ -1.13
THP1YOL072W SKI3P17883 1432 aaKnown RBP8.01□□□□□ -1.13
THP1YOL072W BBC1P47068 1157 aa7.99□□□□□ -1.13
THP1YOL072W ATG2P53855 1592 aa7.99□□□□□ -1.13
THP1YOL072W TIF11P38912 153 aaKnown RBP7.98□□□□□ -1.13
THP1YOL072W ESP1Q03018 1630 aa7.98□□□□□ -1.13
THP1YOL072W FKH1P40466 484 aa7.97□□□□□ -1.13
THP1YOL072W MDS3P53094 1487 aa7.96□□□□□ -1.14
THP1YOL072W GTT3P39996 337 aa7.95□□□□□ -1.14
THP1YOL072W MYO2P19524 1574 aaKnown RBP7.94□□□□□ -1.14
THP1YOL072W PEP1P32319 1579 aa7.92□□□□□ -1.14
THP1YOL072W BMT6Q12291 365 aa7.87□□□□□ -1.15
THP1YOL072W YPK9Q12697 1472 aa7.87□□□□□ -1.15
THP1YOL072W RSM7P47150 247 aa7.86□□□□□ -1.15
THP1YOL072W AI2P03876 854 aa7.85□□□□□ -1.15
THP1YOL072W LDB19Q12502 818 aa7.85□□□□□ -1.15
THP1YOL072W ULI1P43604 169 aa7.83□□□□□ -1.16
THP1YOL072W POL1P13382 1468 aa7.82□□□□□ -1.16
THP1YOL072W SCC2Q04002 1493 aa7.82□□□□□ -1.16
THP1YOL072W STU1P38198 1513 aa7.81□□□□□ -1.16
THP1YOL072W UFD4P33202 1483 aa7.8□□□□□ -1.16
THP1YOL072W IOC2Q12072 812 aa7.78□□□□□ -1.16
THP1YOL072W RPO31P04051 1460 aa7.77□□□□□ -1.16
THP1YOL072W RKR1Q04781 1562 aa7.76□□□□□ -1.17
THP1YOL072W TOP2P06786 1428 aaKnown RBP7.72□□□□□ -1.17
THP1YOL072W YOR1P53049 1477 aa7.72□□□□□ -1.17
THP1YOL072W BPT1P14772 1559 aa7.72□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms