Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 YML009W-BYML009W-B 477 nt23.56■■□□□ 1.36
UBP9P39967 NSR1YGR159C 1245 nt23.19■■□□□ 1.3
UBP9P39967 NOP1YDL014W 984 nt22.98■■□□□ 1.27
UBP9P39967 YKL036CYKL036C 393 nt21.46■■□□□ 1.03
UBP9P39967 MDJ1YFL016C 1536 nt20.37■□□□□ 0.85
UBP9P39967 Q0297Q0297 156 nt20.22■□□□□ 0.83
UBP9P39967 SRX1YKL086W 384 nt20.09■□□□□ 0.81
UBP9P39967 YJL027CYJL027C 417 nt20.08■□□□□ 0.81
UBP9P39967 SCS3YGL126W 1143 nt19.67■□□□□ 0.74
UBP9P39967 YCR051WYCR051W 669 nt19.1■□□□□ 0.65
UBP9P39967 YOL085CYOL085C 342 nt18.6■□□□□ 0.57
UBP9P39967 PKP1YIL042C 1185 nt18.3■□□□□ 0.52
UBP9P39967 RPP1BYDL130W 321 nt18.15■□□□□ 0.5
UBP9P39967 DBP2YNL112W 1641 nt18.14■□□□□ 0.49
UBP9P39967 TRN1tP(UGG)A 72 nt18.03■□□□□ 0.48
UBP9P39967 SUF9tP(UGG)F 72 nt18.03■□□□□ 0.48
UBP9P39967 SUF8tP(UGG)H 72 nt18.03■□□□□ 0.48
UBP9P39967 tP(UGG)LtP(UGG)L 72 nt18.03■□□□□ 0.48
UBP9P39967 SUF7tP(UGG)M 72 nt18.03■□□□□ 0.48
UBP9P39967 tP(UGG)N1tP(UGG)N1 72 nt18.03■□□□□ 0.48
UBP9P39967 tP(UGG)N2tP(UGG)N2 72 nt18.03■□□□□ 0.48
UBP9P39967 tP(UGG)O1tP(UGG)O1 72 nt18.03■□□□□ 0.48
UBP9P39967 SUF11tP(UGG)O2 72 nt18.03■□□□□ 0.48
UBP9P39967 VAR1Q0140 1197 nt17.97■□□□□ 0.47
UBP9P39967 CCC1YLR220W 969 nt17.87■□□□□ 0.45
UBP9P39967 SCJ1YMR214W 1134 nt17.71■□□□□ 0.43
UBP9P39967 ATS1YAL020C 1002 nt17.67■□□□□ 0.42
UBP9P39967 PET122YER153C 765 nt17.32■□□□□ 0.36
UBP9P39967 YBR190WYBR190W 312 nt17.28■□□□□ 0.36
UBP9P39967 SCR1SCR1 522 nt17.18■□□□□ 0.34
UBP9P39967 tP(UGG)O3tP(UGG)O3 72 nt17.14■□□□□ 0.33
UBP9P39967 RVS167YDR388W 1449 nt17.06■□□□□ 0.32
UBP9P39967 YGR139WYGR139W 339 nt17.04■□□□□ 0.32
UBP9P39967 RTC3YHR087W 336 nt16.93■□□□□ 0.3
UBP9P39967 RRN5YLR141W 1092 nt16.85■□□□□ 0.29
UBP9P39967 Q0017Q0017 162 nt16.65■□□□□ 0.26
UBP9P39967 YDJ1YNL064C 1230 nt16.57■□□□□ 0.24
UBP9P39967 RSB1YOR049C 1065 nt16.56■□□□□ 0.24
UBP9P39967 SHR5YOL110W 714 nt16.55■□□□□ 0.24
UBP9P39967 YER088W-BYER088W-B 147 nt16.52■□□□□ 0.24
UBP9P39967 PST2YDR032C 597 nt16.32■□□□□ 0.2
UBP9P39967 Q0142Q0142 177 nt16.21■□□□□ 0.19
UBP9P39967 GAR1YHR089C 618 nt16.18■□□□□ 0.18
UBP9P39967 YDR509WYDR509W 348 nt16.17■□□□□ 0.18
UBP9P39967 DEP1YAL013W 1218 nt16.02■□□□□ 0.16
UBP9P39967 URN1YPR152C 1398 nt15.94■□□□□ 0.14
UBP9P39967 YKL097CYKL097C 411 nt15.79■□□□□ 0.12
UBP9P39967 YNL208WYNL208W 600 nt15.77■□□□□ 0.12
UBP9P39967 RPN10YHR200W 807 nt15.73■□□□□ 0.11
UBP9P39967 OPI9YLR338W 858 nt15.65■□□□□ 0.1
UBP9P39967 TIR1YER011W 765 nt15.62■□□□□ 0.09
UBP9P39967 SHU1YHL006C 453 nt15.61■□□□□ 0.09
UBP9P39967 PUT4YOR348C 1884 nt15.51■□□□□ 0.07
UBP9P39967 SAH1YER043C 1350 nt15.5■□□□□ 0.07
UBP9P39967 Q0144Q0144 330 nt15.49■□□□□ 0.07
UBP9P39967 SSA1YAL005C 1929 nt15.39■□□□□ 0.05
UBP9P39967 ARE1YCR048W 1833 nt15.32■□□□□ 0.04
UBP9P39967 YAL037C-BYAL037C-B 975 nt15.3■□□□□ 0.04
UBP9P39967 Q0255Q0255 1419 nt15.26■□□□□ 0.03
UBP9P39967 YJR018WYJR018W 363 nt15.22■□□□□ 0.03
UBP9P39967 SRB2YHR041C 633 nt15.21■□□□□ 0.03
UBP9P39967 PAM17YKR065C 594 nt15.19■□□□□ 0.02
UBP9P39967 PUN1YLR414C 792 nt15.19■□□□□ 0.02
UBP9P39967 AI5_BETAQ0075 1065 nt15.17■□□□□ 0.02
UBP9P39967 YOR169CYOR169C 465 nt15.17■□□□□ 0.02
UBP9P39967 YGL188CYGL188C 174 nt15.14■□□□□ 0.01
UBP9P39967 YOR139CYOR139C 393 nt15.14■□□□□ 0.01
UBP9P39967 YHR049C-AYHR049C-A 297 nt15.1■□□□□ 0.01
UBP9P39967 YJR120WYJR120W 351 nt15.06■□□□□ 0
UBP9P39967 POA1YBR022W 534 nt15.06■□□□□ 0
UBP9P39967 SEM1YDR363W-A 270 nt15□□□□□ -0.01
UBP9P39967 WWM1YFL010C 636 nt14.99□□□□□ -0.01
UBP9P39967 PTC2YER089C 1395 nt14.98□□□□□ -0.01
UBP9P39967 RPP2BYDR382W 333 nt14.96□□□□□ -0.01
UBP9P39967 YGR021WYGR021W 873 nt14.94□□□□□ -0.02
UBP9P39967 NPL3YDR432W 1245 nt14.93□□□□□ -0.02
UBP9P39967 HOM6YJR139C 1080 nt14.93□□□□□ -0.02
UBP9P39967 MNP1YGL068W 585 nt14.91□□□□□ -0.02
UBP9P39967 BMT5YIL096C 1011 nt14.91□□□□□ -0.02
UBP9P39967 CSM2YIL132C 642 nt14.83□□□□□ -0.04
UBP9P39967 PAU21YOR394W 495 nt14.8□□□□□ -0.04
UBP9P39967 PAU22YPL282C 495 nt14.8□□□□□ -0.04
UBP9P39967 BUD23YCR047C 828 nt14.78□□□□□ -0.04
UBP9P39967 BUR6YER159C 429 nt14.76□□□□□ -0.05
UBP9P39967 SSA3YBL075C 1950 nt14.74□□□□□ -0.05
UBP9P39967 NAB2YGL122C 1578 nt14.73□□□□□ -0.05
UBP9P39967 BDH2YAL061W 1254 nt14.72□□□□□ -0.05
UBP9P39967 YOL037CYOL037C 354 nt14.72□□□□□ -0.05
UBP9P39967 YFL021C-AYFL021C-A 855 nt14.71□□□□□ -0.05
UBP9P39967 RKM5YLR137W 1104 nt14.71□□□□□ -0.05
UBP9P39967 ARO7YPR060C 771 nt14.69□□□□□ -0.06
UBP9P39967 ATP6Q0085 780 nt14.67□□□□□ -0.06
UBP9P39967 BSC6YOL137W 1494 nt14.67□□□□□ -0.06
UBP9P39967 INM2YDR287W 879 nt14.63□□□□□ -0.07
UBP9P39967 DAL1YIR027C 1383 nt14.6□□□□□ -0.07
UBP9P39967 AI3Q0060 1248 nt14.59□□□□□ -0.07
UBP9P39967 LSM3YLR438C-A 270 nt14.58□□□□□ -0.08
UBP9P39967 FPR4YLR449W 1179 nt14.58□□□□□ -0.08
UBP9P39967 REG2YBR050C 1017 nt14.57□□□□□ -0.08
UBP9P39967 FIS1YIL065C 468 nt14.56□□□□□ -0.08
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms