RNA–Protein interactions for RNA: YNL254C

RTC4, Transcript of Protein of unknown function, yeastyeast

Gene RTC4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC4YNL254C MTC1P47018 478 aaKnown RBP18.2■□□□□ 0.5
RTC4YNL254C FAP1P53971 965 aa17.45■□□□□ 0.38
RTC4YNL254C PRY3P47033 881 aa16.46■□□□□ 0.23
RTC4YNL254C DRS1P32892 752 aaKnown RBP16.12■□□□□ 0.17
RTC4YNL254C AAD16Q02895 342 aa15.88■□□□□ 0.13
RTC4YNL254C PRI1P10363 409 aa15.87■□□□□ 0.13
RTC4YNL254C YCK3P39962 524 aa15.59■□□□□ 0.09
RTC4YNL254C HAA1Q12753 694 aaKnown RBP15.31■□□□□ 0.04
RTC4YNL254C ISW2Q08773 1120 aa15.25■□□□□ 0.03
RTC4YNL254C RPG1P38249 964 aaKnown RBP15.19■□□□□ 0.02
RTC4YNL254C TSR3Q12094 313 aaKnown RBP15.02■□□□□ -0
RTC4YNL254C DIP2Q12220 943 aaPredicted RBP14.46□□□□□ -0.09
RTC4YNL254C MRPL32P25348 183 aa14.34□□□□□ -0.11
RTC4YNL254C RSE1Q04693 1361 aaKnown RBP14.2□□□□□ -0.14
RTC4YNL254C YGL015CP33199 130 aa13.98□□□□□ -0.17
RTC4YNL254C RPL17AP05740 184 aaKnown RBP13.85□□□□□ -0.19
RTC4YNL254C RPL17BP46990 184 aaKnown RBP13.85□□□□□ -0.19
RTC4YNL254C REB1P21538 810 aa13.83□□□□□ -0.2
RTC4YNL254C AVT3P36062 692 aa13.67□□□□□ -0.22
RTC4YNL254C CDC27P38042 758 aa13.55□□□□□ -0.24
RTC4YNL254C YKR023WP36119 530 aaKnown RBP13.28□□□□□ -0.28
RTC4YNL254C BUD31P25337 157 aaPredicted RBP13.24□□□□□ -0.29
RTC4YNL254C MAP2P38174 421 aaKnown RBP13.21□□□□□ -0.29
RTC4YNL254C SPT21P35209 758 aa13.19□□□□□ -0.3
RTC4YNL254C UBP10P53874 792 aaPredicted RBP13.16□□□□□ -0.3
RTC4YNL254C DCD1P06773 312 aa13.04□□□□□ -0.32
RTC4YNL254C HOP09932 586 aa13.04□□□□□ -0.32
RTC4YNL254C SGS1P35187 1447 aa13□□□□□ -0.33
RTC4YNL254C TFC8Q12308 588 aa12.97□□□□□ -0.33
RTC4YNL254C INO80P53115 1489 aa12.97□□□□□ -0.33
RTC4YNL254C BFR2Q06631 534 aaKnown RBP12.94□□□□□ -0.34
RTC4YNL254C MON2P48563 1636 aaPredicted RBP12.91□□□□□ -0.34
RTC4YNL254C SCY1P53009 804 aa12.78□□□□□ -0.36
RTC4YNL254C TCB3Q03640 1545 aaKnown RBP12.78□□□□□ -0.36
RTC4YNL254C TY1B-DR4Q07793 1604 aa12.66□□□□□ -0.38
RTC4YNL254C TIF4632P39936 914 aaKnown RBP12.62□□□□□ -0.39
RTC4YNL254C SLX5P32828 619 aaKnown RBP12.61□□□□□ -0.39
RTC4YNL254C TGL3P40308 642 aa12.59□□□□□ -0.39
RTC4YNL254C SWR1Q05471 1514 aa12.55□□□□□ -0.4
RTC4YNL254C BCH2P36122 765 aa12.54□□□□□ -0.4
RTC4YNL254C SIS1P25294 352 aaKnown RBP12.52□□□□□ -0.41
RTC4YNL254C RIM101P33400 625 aa12.5□□□□□ -0.41
RTC4YNL254C UBP9P39967 754 aa12.45□□□□□ -0.42
RTC4YNL254C HSL1P34244 1518 aa12.37□□□□□ -0.43
RTC4YNL254C SPT6P23615 1451 aaKnown RBP12.36□□□□□ -0.43
RTC4YNL254C DNA2P38859 1522 aa12.35□□□□□ -0.43
RTC4YNL254C SPA2P23201 1466 aaKnown RBP12.33□□□□□ -0.44
RTC4YNL254C KOG1P38873 1557 aa12.24□□□□□ -0.45
RTC4YNL254C SSN2P38931 1420 aa12.24□□□□□ -0.45
RTC4YNL254C EPS1P40557 701 aa12.14□□□□□ -0.47
RTC4YNL254C HIR3P47171 1648 aa12.14□□□□□ -0.47
RTC4YNL254C BDF1P35817 686 aa12.12□□□□□ -0.47
RTC4YNL254C OXP1P28273 1286 aa12.11□□□□□ -0.47
RTC4YNL254C XRN1P22147 1528 aaKnown RBP12.04□□□□□ -0.48
RTC4YNL254C YBL029C-AQ3E756 94 aa12□□□□□ -0.49
RTC4YNL254C MST1P07236 462 aa11.97□□□□□ -0.49
RTC4YNL254C PTP3P40048 928 aa11.92□□□□□ -0.5
RTC4YNL254C YOR238WQ08634 303 aa11.89□□□□□ -0.51
RTC4YNL254C ECM5Q03214 1411 aa11.88□□□□□ -0.51
RTC4YNL254C YIL055CP40523 627 aaKnown RBP11.85□□□□□ -0.51
RTC4YNL254C BUD4P47136 1447 aa11.84□□□□□ -0.51
RTC4YNL254C THO2P53552 1597 aaKnown RBP11.84□□□□□ -0.51
RTC4YNL254C REV3P14284 1504 aa11.82□□□□□ -0.52
RTC4YNL254C TAF2P23255 1407 aa11.78□□□□□ -0.52
RTC4YNL254C VNX1P42839 908 aa11.78□□□□□ -0.52
RTC4YNL254C NSR1P27476 414 aaKnown RBP RIP-Chip data11.73□□□□□ -0.53not detected
RTC4YNL254C RSM7P47150 247 aa11.7□□□□□ -0.54
RTC4YNL254C AI2P03876 854 aa11.69□□□□□ -0.54
RTC4YNL254C BBC1P47068 1157 aa11.69□□□□□ -0.54
RTC4YNL254C YAP5P40574 245 aa11.68□□□□□ -0.54
RTC4YNL254C WSC3Q12215 556 aa11.68□□□□□ -0.54
RTC4YNL254C SPP1Q03012 353 aa11.67□□□□□ -0.54
RTC4YNL254C SIN3P22579 1536 aa11.66□□□□□ -0.54
RTC4YNL254C MDS3P53094 1487 aa11.66□□□□□ -0.54
RTC4YNL254C ATG2P53855 1592 aa11.65□□□□□ -0.54
RTC4YNL254C SKI3P17883 1432 aaKnown RBP11.63□□□□□ -0.55
RTC4YNL254C YAH1Q12184 172 aaKnown RBP11.63□□□□□ -0.55
RTC4YNL254C SSK2P53599 1579 aa11.62□□□□□ -0.55
RTC4YNL254C ESP1Q03018 1630 aa11.58□□□□□ -0.56
RTC4YNL254C PEP1P32319 1579 aa11.58□□□□□ -0.56
RTC4YNL254C AIR2Q12476 344 aaKnown RBP11.52□□□□□ -0.57
RTC4YNL254C MYO2P19524 1574 aaKnown RBP11.48□□□□□ -0.57
RTC4YNL254C TIF11P38912 153 aaKnown RBP11.47□□□□□ -0.57
RTC4YNL254C FKH1P40466 484 aa11.46□□□□□ -0.57
RTC4YNL254C GTT3P39996 337 aa11.44□□□□□ -0.58
RTC4YNL254C YJL171CP46992 396 aa11.4□□□□□ -0.58
RTC4YNL254C PIB1Q06651 286 aa11.4□□□□□ -0.58
RTC4YNL254C YLR271WQ06152 274 aa11.39□□□□□ -0.59
RTC4YNL254C YPK9Q12697 1472 aa11.37□□□□□ -0.59
RTC4YNL254C BPT1P14772 1559 aa11.36□□□□□ -0.59
RTC4YNL254C LDB19Q12502 818 aa11.33□□□□□ -0.6
RTC4YNL254C UFD4P33202 1483 aa11.32□□□□□ -0.6
RTC4YNL254C SCC2Q04002 1493 aa11.32□□□□□ -0.6
RTC4YNL254C ULI1P43604 169 aa11.3□□□□□ -0.6
RTC4YNL254C PSD2P53037 1138 aaKnown RBP11.3□□□□□ -0.6
RTC4YNL254C IOC2Q12072 812 aa11.29□□□□□ -0.6
RTC4YNL254C MRM1P25270 412 aa11.23□□□□□ -0.61
RTC4YNL254C RQC2Q12532 1038 aaKnown RBP11.23□□□□□ -0.61
RTC4YNL254C RPO31P04051 1460 aa11.23□□□□□ -0.61
RTC4YNL254C RKR1Q04781 1562 aa11.21□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms