RNA–Protein interactions for RNA: YNL117W

MLS1, Transcript of Malate synthase, enzyme of the glyoxylate cycle, yeastyeast

Gene MLS1, Length 1,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MLS1YNL117W DRS1P32892 752 aaKnown RBP16.08■□□□□ 0.17
MLS1YNL117W TFA1P36100 482 aa14.84□□□□□ -0.03
MLS1YNL117W BFR2Q06631 534 aaKnown RBP14.6□□□□□ -0.07
MLS1YNL117W MTC1P47018 478 aaKnown RBP14.48□□□□□ -0.09
MLS1YNL117W RQC2Q12532 1038 aaKnown RBP14.23□□□□□ -0.13
MLS1YNL117W TAF7Q05021 590 aa13.52□□□□□ -0.25
MLS1YNL117W AVT3P36062 692 aa13.45□□□□□ -0.26
MLS1YNL117W DIP2Q12220 943 aaPredicted RBP13.19□□□□□ -0.3
MLS1YNL117W INO80P53115 1489 aa12.88□□□□□ -0.35
MLS1YNL117W MON2P48563 1636 aaPredicted RBP12.8□□□□□ -0.36
MLS1YNL117W DMA1P38823 416 aa12.8□□□□□ -0.36
MLS1YNL117W LEO1P38439 464 aa12.57□□□□□ -0.4
MLS1YNL117W DNA2P38859 1522 aa12.22□□□□□ -0.45
MLS1YNL117W SWR1Q05471 1514 aa12.13□□□□□ -0.47
MLS1YNL117W KOG1P38873 1557 aa12.05□□□□□ -0.48
MLS1YNL117W RSE1Q04693 1361 aaKnown RBP12.02□□□□□ -0.49
MLS1YNL117W TCB3Q03640 1545 aaKnown RBP12.01□□□□□ -0.49
MLS1YNL117W PTP3P40048 928 aa11.92□□□□□ -0.5
MLS1YNL117W TY1B-DR4Q07793 1604 aa11.89□□□□□ -0.51
MLS1YNL117W LEU3P08638 886 aa11.86□□□□□ -0.51
MLS1YNL117W SGS1P35187 1447 aa11.7□□□□□ -0.54
MLS1YNL117W SAS10Q12136 610 aaPredicted RBP11.65□□□□□ -0.54
MLS1YNL117W SSP1P38871 571 aa11.55□□□□□ -0.56
MLS1YNL117W DMA2P53924 522 aa11.52□□□□□ -0.56
MLS1YNL117W SPT6P23615 1451 aaKnown RBP11.52□□□□□ -0.57
MLS1YNL117W HSL1P34244 1518 aa11.49□□□□□ -0.57
MLS1YNL117W RPL17AP05740 184 aaKnown RBP11.46□□□□□ -0.57
MLS1YNL117W RPL17BP46990 184 aaKnown RBP11.46□□□□□ -0.57
MLS1YNL117W SPA2P23201 1466 aaKnown RBP11.46□□□□□ -0.57
MLS1YNL117W ISW2Q08773 1120 aa11.43□□□□□ -0.58
MLS1YNL117W RPN1P38764 993 aaKnown RBP11.43□□□□□ -0.58
MLS1YNL117W RIM101P33400 625 aa11.37□□□□□ -0.59
MLS1YNL117W ECM5Q03214 1411 aa11.37□□□□□ -0.59
MLS1YNL117W RLF2Q12495 606 aa11.35□□□□□ -0.59
MLS1YNL117W ABP1P15891 592 aaKnown RBP11.27□□□□□ -0.61
MLS1YNL117W BUD4P47136 1447 aa11.26□□□□□ -0.61
MLS1YNL117W RPG1P38249 964 aaKnown RBP11.24□□□□□ -0.61
MLS1YNL117W HIR3P47171 1648 aa11.23□□□□□ -0.61
MLS1YNL117W THO2P53552 1597 aaKnown RBP11.23□□□□□ -0.61
MLS1YNL117W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.22□□□□□ -0.61not detected
MLS1YNL117W REB1P21538 810 aa11.17□□□□□ -0.62
MLS1YNL117W SPT21P35209 758 aa11.17□□□□□ -0.62
MLS1YNL117W MDS3P53094 1487 aa11.14□□□□□ -0.63
MLS1YNL117W IFH1P39520 1085 aa11.13□□□□□ -0.63
MLS1YNL117W AIM44Q99299 758 aa11.13□□□□□ -0.63
MLS1YNL117W CKB1P43639 278 aa11.11□□□□□ -0.63
MLS1YNL117W YAH1Q12184 172 aaKnown RBP11.08□□□□□ -0.64
MLS1YNL117W OXP1P28273 1286 aa11.06□□□□□ -0.64
MLS1YNL117W XRN1P22147 1528 aaKnown RBP11.02□□□□□ -0.64
MLS1YNL117W YLR271WQ06152 274 aa11.02□□□□□ -0.64
MLS1YNL117W MGA2P40578 1113 aa10.99□□□□□ -0.65
MLS1YNL117W REV3P14284 1504 aa10.98□□□□□ -0.65
MLS1YNL117W SPB4P25808 606 aaPredicted RBP10.98□□□□□ -0.65
MLS1YNL117W PEP1P32319 1579 aa10.95□□□□□ -0.66
MLS1YNL117W NAP1P25293 417 aaKnown RBP10.93□□□□□ -0.66
MLS1YNL117W YIL055CP40523 627 aaKnown RBP10.91□□□□□ -0.66
MLS1YNL117W BPT1P14772 1559 aa10.88□□□□□ -0.67
MLS1YNL117W ATG2P53855 1592 aa10.84□□□□□ -0.67
MLS1YNL117W HGH1P48362 394 aaKnown RBP10.8□□□□□ -0.68
MLS1YNL117W PRI1P10363 409 aa10.76□□□□□ -0.69
MLS1YNL117W ORC1P54784 914 aaPredicted RBP10.76□□□□□ -0.69
MLS1YNL117W IOC4Q04213 475 aa10.76□□□□□ -0.69
MLS1YNL117W CST9Q06032 482 aa10.76□□□□□ -0.69
MLS1YNL117W SKI3P17883 1432 aaKnown RBP10.75□□□□□ -0.69
MLS1YNL117W VPS70P47161 811 aa10.75□□□□□ -0.69
MLS1YNL117W YPR148CQ06523 435 aa10.75□□□□□ -0.69
MLS1YNL117W KIN1P13185 1064 aa10.74□□□□□ -0.69
MLS1YNL117W YML020WQ03722 664 aa10.73□□□□□ -0.69
MLS1YNL117W RSM7P47150 247 aa10.73□□□□□ -0.69
MLS1YNL117W SET1P38827 1080 aaKnown RBP10.72□□□□□ -0.69
MLS1YNL117W TAF2P23255 1407 aa10.71□□□□□ -0.69
MLS1YNL117W YCF1P39109 1515 aaKnown RBP10.69□□□□□ -0.7
MLS1YNL117W NOP8Q08287 484 aaPredicted RBP10.68□□□□□ -0.7
MLS1YNL117W DSF2P38213 736 aa10.66□□□□□ -0.7
MLS1YNL117W YNR021WP53723 404 aaKnown RBP10.66□□□□□ -0.7
MLS1YNL117W SSN2P38931 1420 aa10.65□□□□□ -0.7
MLS1YNL117W SSK2P53599 1579 aa10.64□□□□□ -0.71
MLS1YNL117W SIN3P22579 1536 aa10.63□□□□□ -0.71
MLS1YNL117W SLX8P40072 274 aa10.6□□□□□ -0.71
MLS1YNL117W RAM2P29703 316 aa10.58□□□□□ -0.72
MLS1YNL117W AIM7Q12156 149 aa10.57□□□□□ -0.72
MLS1YNL117W PBS2P08018 668 aa10.56□□□□□ -0.72
MLS1YNL117W PSD2P53037 1138 aaKnown RBP10.56□□□□□ -0.72
MLS1YNL117W MIF2P35201 549 aa10.55□□□□□ -0.72
MLS1YNL117W UFD4P33202 1483 aa10.54□□□□□ -0.72
MLS1YNL117W SSA1P10591 642 aaKnown RBP10.51□□□□□ -0.73
MLS1YNL117W GEF1P37020 779 aa10.51□□□□□ -0.73
MLS1YNL117W GLC3P32775 704 aa10.5□□□□□ -0.73
MLS1YNL117W GUA1P38625 525 aaKnown RBP10.5□□□□□ -0.73
MLS1YNL117W ESP1Q03018 1630 aa10.47□□□□□ -0.73
MLS1YNL117W YKR023WP36119 530 aaKnown RBP10.47□□□□□ -0.73
MLS1YNL117W NOP7P53261 605 aaKnown RBP10.46□□□□□ -0.74
MLS1YNL117W MET5P47169 1442 aa10.44□□□□□ -0.74
MLS1YNL117W AI2P03876 854 aa10.42□□□□□ -0.74
MLS1YNL117W SUB2Q07478 446 aaKnown RBP10.42□□□□□ -0.74
MLS1YNL117W HPC2Q01448 625 aa10.41□□□□□ -0.74
MLS1YNL117W SCC2Q04002 1493 aa10.41□□□□□ -0.74
MLS1YNL117W YPK9Q12697 1472 aa10.41□□□□□ -0.74
MLS1YNL117W MAM3Q12296 706 aa10.41□□□□□ -0.74
MLS1YNL117W CHD1P32657 1468 aa10.4□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms