RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeastyeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLF1YLR117C MTC1P47018 478 aaKnown RBP8.06□□□□□ -1.12
CLF1YLR117C DRS1P32892 752 aaKnown RBP7.44□□□□□ -1.22
CLF1YLR117C FAP1P53971 965 aa7.43□□□□□ -1.22
CLF1YLR117C BFR2Q06631 534 aaKnown RBP7.39□□□□□ -1.23
CLF1YLR117C RQC2Q12532 1038 aaKnown RBP7.16□□□□□ -1.26
CLF1YLR117C NOP2P40991 618 aaKnown RBP7.07□□□□□ -1.28
CLF1YLR117C SGS1P35187 1447 aa7.02□□□□□ -1.29
CLF1YLR117C PRY3P47033 881 aa6.97□□□□□ -1.29
CLF1YLR117C SPA2P23201 1466 aaKnown RBP6.93□□□□□ -1.3
CLF1YLR117C INO80P53115 1489 aa6.92□□□□□ -1.3
CLF1YLR117C PRI1P10363 409 aa6.86□□□□□ -1.31
CLF1YLR117C NSR1P27476 414 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
CLF1YLR117C AAD16Q02895 342 aa6.85□□□□□ -1.31
CLF1YLR117C TCB3Q03640 1545 aaKnown RBP6.84□□□□□ -1.31
CLF1YLR117C SKI3P17883 1432 aaKnown RBP6.83□□□□□ -1.32
CLF1YLR117C TY1B-DR4Q07793 1604 aa6.79□□□□□ -1.32
CLF1YLR117C EBP2P36049 427 aaKnown RBP6.78□□□□□ -1.32
CLF1YLR117C MON2P48563 1636 aaPredicted RBP6.78□□□□□ -1.32
CLF1YLR117C CAB3P36076 571 aa6.77□□□□□ -1.33
CLF1YLR117C SSN2P38931 1420 aa6.75□□□□□ -1.33
CLF1YLR117C ISW2Q08773 1120 aa6.74□□□□□ -1.33
CLF1YLR117C RPG1P38249 964 aaKnown RBP6.66□□□□□ -1.34
CLF1YLR117C HSL1P34244 1518 aa6.64□□□□□ -1.35
CLF1YLR117C SWR1Q05471 1514 aa6.64□□□□□ -1.35
CLF1YLR117C SPT6P23615 1451 aaKnown RBP6.61□□□□□ -1.35
CLF1YLR117C URN1Q06525 465 aaKnown RBP6.58□□□□□ -1.36
CLF1YLR117C DIP2Q12220 943 aaPredicted RBP6.57□□□□□ -1.36
CLF1YLR117C SIS2P36024 562 aa6.56□□□□□ -1.36
CLF1YLR117C YPR148CQ06523 435 aa6.55□□□□□ -1.36
CLF1YLR117C HAA1Q12753 694 aaKnown RBP6.53□□□□□ -1.36
CLF1YLR117C HIR3P47171 1648 aa6.52□□□□□ -1.37
CLF1YLR117C YCK3P39962 524 aa6.49□□□□□ -1.37
CLF1YLR117C TSR3Q12094 313 aaKnown RBP6.48□□□□□ -1.37
CLF1YLR117C XRN1P22147 1528 aaKnown RBP6.45□□□□□ -1.38
CLF1YLR117C DNA2P38859 1522 aa6.44□□□□□ -1.38
CLF1YLR117C ENP1P38333 483 aaKnown RBP6.44□□□□□ -1.38
CLF1YLR117C KOG1P38873 1557 aa6.43□□□□□ -1.38
CLF1YLR117C CHD1P32657 1468 aa6.39□□□□□ -1.39
CLF1YLR117C MMS22Q06164 1454 aa6.39□□□□□ -1.39
CLF1YLR117C REV3P14284 1504 aa6.38□□□□□ -1.39
CLF1YLR117C RSE1Q04693 1361 aaKnown RBP6.38□□□□□ -1.39
CLF1YLR117C TAF7Q05021 590 aa6.37□□□□□ -1.39
CLF1YLR117C UFD4P33202 1483 aa6.35□□□□□ -1.39
CLF1YLR117C SIN3P22579 1536 aa6.34□□□□□ -1.39
CLF1YLR117C THO2P53552 1597 aaKnown RBP6.33□□□□□ -1.4
CLF1YLR117C STH1P32597 1359 aa6.32□□□□□ -1.4
CLF1YLR117C AVT3P36062 692 aa6.31□□□□□ -1.4
CLF1YLR117C TCB2P48231 1178 aa6.31□□□□□ -1.4
CLF1YLR117C SSK2P53599 1579 aa6.3□□□□□ -1.4
CLF1YLR117C BUD4P47136 1447 aa6.29□□□□□ -1.4
CLF1YLR117C YFR016CP43597 1233 aaKnown RBP6.27□□□□□ -1.41
CLF1YLR117C TAF2P23255 1407 aa6.26□□□□□ -1.41
CLF1YLR117C SPP41P38904 1435 aa6.26□□□□□ -1.41
CLF1YLR117C TFA1P36100 482 aa6.26□□□□□ -1.41
CLF1YLR117C ECM5Q03214 1411 aa6.26□□□□□ -1.41
CLF1YLR117C MRPL32P25348 183 aa6.26□□□□□ -1.41
CLF1YLR117C ESP1Q03018 1630 aa6.25□□□□□ -1.41
CLF1YLR117C ATG2P53855 1592 aa6.25□□□□□ -1.41
CLF1YLR117C MNN4P36044 1178 aa6.24□□□□□ -1.41
CLF1YLR117C SPT7P35177 1332 aa6.23□□□□□ -1.41
CLF1YLR117C CLC1P17891 233 aa6.22□□□□□ -1.41
CLF1YLR117C POL5P39985 1022 aaKnown RBP6.22□□□□□ -1.41
CLF1YLR117C MYO2P19524 1574 aaKnown RBP6.22□□□□□ -1.41
CLF1YLR117C PRS1P32895 427 aaKnown RBP6.21□□□□□ -1.41
CLF1YLR117C SEC3P33332 1336 aaKnown RBP6.2□□□□□ -1.42
CLF1YLR117C TRM732Q03496 1420 aa6.2□□□□□ -1.42
CLF1YLR117C IME2P32581 645 aa6.2□□□□□ -1.42
CLF1YLR117C RPS0BP46654 252 aaKnown RBP6.2□□□□□ -1.42
CLF1YLR117C MDS3P53094 1487 aa6.19□□□□□ -1.42
CLF1YLR117C PEP1P32319 1579 aa6.19□□□□□ -1.42
CLF1YLR117C REB1P21538 810 aa6.19□□□□□ -1.42
CLF1YLR117C LEO1P38439 464 aa6.18□□□□□ -1.42
CLF1YLR117C RPL17AP05740 184 aaKnown RBP6.17□□□□□ -1.42
CLF1YLR117C RPL17BP46990 184 aaKnown RBP6.17□□□□□ -1.42
CLF1YLR117C IKI3Q06706 1349 aaKnown RBP6.17□□□□□ -1.42
CLF1YLR117C YPK9Q12697 1472 aa6.14□□□□□ -1.43
CLF1YLR117C QCR6P00127 147 aa6.13□□□□□ -1.43
CLF1YLR117C CWC22P53333 577 aaKnown RBP6.13□□□□□ -1.43
CLF1YLR117C AIM44Q99299 758 aa6.13□□□□□ -1.43
CLF1YLR117C OPY1P38271 328 aa6.11□□□□□ -1.43
CLF1YLR117C POL1P13382 1468 aa6.1□□□□□ -1.43
CLF1YLR117C SCC2Q04002 1493 aa6.09□□□□□ -1.43
CLF1YLR117C CFT1Q06632 1357 aaKnown RBP6.09□□□□□ -1.44
CLF1YLR117C EAF7P53911 425 aaKnown RBP6.08□□□□□ -1.44
CLF1YLR117C RLF2Q12495 606 aa6.08□□□□□ -1.44
CLF1YLR117C FPR3P38911 411 aaKnown RBP6.07□□□□□ -1.44
CLF1YLR117C STU1P38198 1513 aa6.07□□□□□ -1.44
CLF1YLR117C YGR130CP53278 816 aa6.06□□□□□ -1.44
CLF1YLR117C PDR10P51533 1564 aa6.06□□□□□ -1.44
CLF1YLR117C NUP170P38181 1502 aa6.06□□□□□ -1.44
CLF1YLR117C SSM4P40318 1319 aa6.06□□□□□ -1.44
CLF1YLR117C NOP53Q12080 455 aaKnown RBP6.06□□□□□ -1.44
CLF1YLR117C RPO31P04051 1460 aa6.06□□□□□ -1.44
CLF1YLR117C RKR1Q04781 1562 aa6.05□□□□□ -1.44
CLF1YLR117C SRB8P25648 1427 aa6.05□□□□□ -1.44
CLF1YLR117C RPC31P17890 251 aa6.03□□□□□ -1.44
CLF1YLR117C YGL015CP33199 130 aa6.03□□□□□ -1.44
CLF1YLR117C SNF7P39929 240 aaKnown RBP6.03□□□□□ -1.44
CLF1YLR117C TOP2P06786 1428 aaKnown RBP6.03□□□□□ -1.44
CLF1YLR117C TY2B-LR1P0C2J3 1770 aa6.02□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 60.9 ms