Protein–RNA interactions for Protein: P25648

SRB8, Mediator of RNA polymerase II transcription subunit 12, yeastyeast

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRB8P25648 YML009W-BYML009W-B 477 nt30.42■■■□□ 2.46
SRB8P25648 NSR1YGR159C 1245 nt29.55■■■□□ 2.32
SRB8P25648 NOP1YDL014W 984 nt29.47■■■□□ 2.31
SRB8P25648 YKL036CYKL036C 393 nt27.7■■■□□ 2.03
SRB8P25648 MDJ1YFL016C 1536 nt26.17■■□□□ 1.78
SRB8P25648 YJL027CYJL027C 417 nt25.98■■□□□ 1.75
SRB8P25648 Q0297Q0297 156 nt25.96■■□□□ 1.75
SRB8P25648 SRX1YKL086W 384 nt25.82■■□□□ 1.72
SRB8P25648 SCS3YGL126W 1143 nt25.52■■□□□ 1.68
SRB8P25648 YCR051WYCR051W 669 nt24.66■■□□□ 1.54
SRB8P25648 YOL085CYOL085C 342 nt23.95■■□□□ 1.42
SRB8P25648 PKP1YIL042C 1185 nt23.73■■□□□ 1.39
SRB8P25648 RPP1BYDL130W 321 nt23.33■■□□□ 1.32
SRB8P25648 DBP2YNL112W 1641 nt23.19■■□□□ 1.3
SRB8P25648 TRN1tP(UGG)A 72 nt23.17■■□□□ 1.3
SRB8P25648 SUF9tP(UGG)F 72 nt23.17■■□□□ 1.3
SRB8P25648 SUF8tP(UGG)H 72 nt23.17■■□□□ 1.3
SRB8P25648 tP(UGG)LtP(UGG)L 72 nt23.17■■□□□ 1.3
SRB8P25648 SUF7tP(UGG)M 72 nt23.17■■□□□ 1.3
SRB8P25648 tP(UGG)N1tP(UGG)N1 72 nt23.17■■□□□ 1.3
SRB8P25648 tP(UGG)N2tP(UGG)N2 72 nt23.17■■□□□ 1.3
SRB8P25648 tP(UGG)O1tP(UGG)O1 72 nt23.17■■□□□ 1.3
SRB8P25648 SUF11tP(UGG)O2 72 nt23.17■■□□□ 1.3
SRB8P25648 CCC1YLR220W 969 nt23.02■■□□□ 1.28
SRB8P25648 SCJ1YMR214W 1134 nt22.86■■□□□ 1.25
SRB8P25648 ATS1YAL020C 1002 nt22.82■■□□□ 1.24
SRB8P25648 PET122YER153C 765 nt22.38■■□□□ 1.17
SRB8P25648 SCR1SCR1 522 nt22.14■■□□□ 1.13
SRB8P25648 tP(UGG)O3tP(UGG)O3 72 nt22.03■■□□□ 1.12
SRB8P25648 YBR190WYBR190W 312 nt21.96■■□□□ 1.11
SRB8P25648 RVS167YDR388W 1449 nt21.86■■□□□ 1.09
SRB8P25648 RRN5YLR141W 1092 nt21.68■■□□□ 1.06
SRB8P25648 RTC3YHR087W 336 nt21.63■■□□□ 1.05
SRB8P25648 RSB1YOR049C 1065 nt21.46■■□□□ 1.03
SRB8P25648 YER088W-BYER088W-B 147 nt21.26■□□□□ 0.99
SRB8P25648 SHR5YOL110W 714 nt21.21■□□□□ 0.99
SRB8P25648 YDJ1YNL064C 1230 nt21.2■□□□□ 0.98
SRB8P25648 PST2YDR032C 597 nt21.02■□□□□ 0.96
SRB8P25648 GAR1YHR089C 618 nt20.84■□□□□ 0.93
SRB8P25648 DEP1YAL013W 1218 nt20.64■□□□□ 0.89
SRB8P25648 YKL097CYKL097C 411 nt20.53■□□□□ 0.88
SRB8P25648 URN1YPR152C 1398 nt20.43■□□□□ 0.86
SRB8P25648 SHU1YHL006C 453 nt20.2■□□□□ 0.82
SRB8P25648 YNL208WYNL208W 600 nt20.16■□□□□ 0.82
SRB8P25648 RPN10YHR200W 807 nt20.12■□□□□ 0.81
SRB8P25648 TIR1YER011W 765 nt20.06■□□□□ 0.8
SRB8P25648 OPI9YLR338W 858 nt19.93■□□□□ 0.78
SRB8P25648 YAL037C-BYAL037C-B 975 nt19.85■□□□□ 0.77
SRB8P25648 SAH1YER043C 1350 nt19.81■□□□□ 0.76
SRB8P25648 SSA1YAL005C 1929 nt19.76■□□□□ 0.75
SRB8P25648 PUT4YOR348C 1884 nt19.66■□□□□ 0.74
SRB8P25648 SRB2YHR041C 633 nt19.64■□□□□ 0.73
SRB8P25648 YOR139CYOR139C 393 nt19.64■□□□□ 0.73
SRB8P25648 ARE1YCR048W 1833 nt19.49■□□□□ 0.71
SRB8P25648 YJR018WYJR018W 363 nt19.45■□□□□ 0.7
SRB8P25648 NPL3YDR432W 1245 nt19.4■□□□□ 0.7
SRB8P25648 MNP1YGL068W 585 nt19.4■□□□□ 0.7
SRB8P25648 YHR049C-AYHR049C-A 297 nt19.36■□□□□ 0.69
SRB8P25648 PUN1YLR414C 792 nt19.36■□□□□ 0.69
SRB8P25648 YJR120WYJR120W 351 nt19.34■□□□□ 0.69
SRB8P25648 WWM1YFL010C 636 nt19.33■□□□□ 0.68
SRB8P25648 YGR021WYGR021W 873 nt19.23■□□□□ 0.67
SRB8P25648 HOM6YJR139C 1080 nt19.23■□□□□ 0.67
SRB8P25648 RPP2BYDR382W 333 nt19.16■□□□□ 0.66
SRB8P25648 POA1YBR022W 534 nt19.15■□□□□ 0.66
SRB8P25648 PTC2YER089C 1395 nt19.11■□□□□ 0.65
SRB8P25648 YOL037CYOL037C 354 nt19.04■□□□□ 0.64
SRB8P25648 RKM5YLR137W 1104 nt18.96■□□□□ 0.63
SRB8P25648 BUD23YCR047C 828 nt18.95■□□□□ 0.62
SRB8P25648 YFL021C-AYFL021C-A 855 nt18.89■□□□□ 0.61
SRB8P25648 BDH2YAL061W 1254 nt18.85■□□□□ 0.61
SRB8P25648 SSA3YBL075C 1950 nt18.82■□□□□ 0.6
SRB8P25648 tM(CAU)CtM(CAU)C 72 nt18.75■□□□□ 0.59
SRB8P25648 IMT4tM(CAU)E 72 nt18.75■□□□□ 0.59
SRB8P25648 IMT3tM(CAU)J3 72 nt18.75■□□□□ 0.59
SRB8P25648 IMT1tM(CAU)O1 72 nt18.75■□□□□ 0.59
SRB8P25648 IMT2tM(CAU)P 72 nt18.75■□□□□ 0.59
SRB8P25648 NAB2YGL122C 1578 nt18.73■□□□□ 0.59
SRB8P25648 FPR4YLR449W 1179 nt18.71■□□□□ 0.59
SRB8P25648 BSC6YOL137W 1494 nt18.68■□□□□ 0.58
SRB8P25648 FIS1YIL065C 468 nt18.67■□□□□ 0.58
SRB8P25648 YBL100CYBL100C 315 nt18.66■□□□□ 0.58
SRB8P25648 DAL1YIR027C 1383 nt18.61■□□□□ 0.57
SRB8P25648 INM2YDR287W 879 nt18.57■□□□□ 0.56
SRB8P25648 PUS2YGL063W 1113 nt18.56■□□□□ 0.56
SRB8P25648 LSM3YLR438C-A 270 nt18.54■□□□□ 0.56
SRB8P25648 PHO4YFR034C 939 nt18.52■□□□□ 0.56
SRB8P25648 YLR281CYLR281C 468 nt18.51■□□□□ 0.55
SRB8P25648 WHI5YOR083W 888 nt18.45■□□□□ 0.54
SRB8P25648 FUN26YAL022C 1554 nt18.39■□□□□ 0.53
SRB8P25648 TRM9YML014W 840 nt18.37■□□□□ 0.53
SRB8P25648 MOT3YMR070W 1473 nt18.28■□□□□ 0.52
SRB8P25648 YLR236CYLR236C 324 nt18.19■□□□□ 0.5
SRB8P25648 CCT6YDR188W 1641 nt18.18■□□□□ 0.5
SRB8P25648 FMP45YDL222C 930 nt18.17■□□□□ 0.5
SRB8P25648 YLR154C-GYLR154C-G 150 nt18.14■□□□□ 0.49
SRB8P25648 DSK2YMR276W 1122 nt18.14■□□□□ 0.49
SRB8P25648 YPR011CYPR011C 981 nt18.12■□□□□ 0.49
SRB8P25648 ALF1YNL148C 765 nt18.07■□□□□ 0.48
SRB8P25648 SUF2tP(AGG)C 72 nt17.98■□□□□ 0.47
Retrieved 100 of 7,029 protein–RNA pairs in 24.5 ms