RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeastyeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOT3YIL038C DRS1P32892 752 aaKnown RBP11.46□□□□□ -0.58
NOT3YIL038C MTC1P47018 478 aaKnown RBP10.63□□□□□ -0.71
NOT3YIL038C TFA1P36100 482 aa10.52□□□□□ -0.73
NOT3YIL038C BFR2Q06631 534 aaKnown RBP10.23□□□□□ -0.77
NOT3YIL038C AVT3P36062 692 aa9.91□□□□□ -0.82
NOT3YIL038C INO80P53115 1489 aa9.52□□□□□ -0.89
NOT3YIL038C DIP2Q12220 943 aaPredicted RBP9.51□□□□□ -0.89
NOT3YIL038C SGS1P35187 1447 aa9.37□□□□□ -0.91
NOT3YIL038C TCB3Q03640 1545 aaKnown RBP9.3□□□□□ -0.92
NOT3YIL038C SPA2P23201 1466 aaKnown RBP9.15□□□□□ -0.94
NOT3YIL038C TY1B-DR4Q07793 1604 aa9.13□□□□□ -0.95
NOT3YIL038C MON2P48563 1636 aaPredicted RBP9.12□□□□□ -0.95
NOT3YIL038C RQC2Q12532 1038 aaKnown RBP9.09□□□□□ -0.95
NOT3YIL038C TAF7Q05021 590 aa9.06□□□□□ -0.96
NOT3YIL038C DMA1P38823 416 aa8.97□□□□□ -0.97
NOT3YIL038C SSN2P38931 1420 aa8.94□□□□□ -0.98
NOT3YIL038C SWR1Q05471 1514 aa8.84□□□□□ -0.99
NOT3YIL038C HSL1P34244 1518 aa8.84□□□□□ -0.99
NOT3YIL038C SPT6P23615 1451 aaKnown RBP8.8□□□□□ -1
NOT3YIL038C HIR3P47171 1648 aa8.67□□□□□ -1.02
NOT3YIL038C SIN3P22579 1536 aa8.64□□□□□ -1.03
NOT3YIL038C KOG1P38873 1557 aa8.64□□□□□ -1.03
NOT3YIL038C LEO1P38439 464 aa8.59□□□□□ -1.03
NOT3YIL038C THO2P53552 1597 aaKnown RBP8.59□□□□□ -1.03
NOT3YIL038C RSE1Q04693 1361 aaKnown RBP8.55□□□□□ -1.04
NOT3YIL038C XRN1P22147 1528 aaKnown RBP8.5□□□□□ -1.05
NOT3YIL038C DNA2P38859 1522 aa8.5□□□□□ -1.05
NOT3YIL038C REV3P14284 1504 aa8.49□□□□□ -1.05
NOT3YIL038C SSK2P53599 1579 aa8.45□□□□□ -1.06
NOT3YIL038C ABP1P15891 592 aaKnown RBP8.44□□□□□ -1.06
NOT3YIL038C BUD4P47136 1447 aa8.42□□□□□ -1.06
NOT3YIL038C PTP3P40048 928 aa8.42□□□□□ -1.06
NOT3YIL038C SPT21P35209 758 aa8.4□□□□□ -1.06
NOT3YIL038C SAS10Q12136 610 aaPredicted RBP8.4□□□□□ -1.07
NOT3YIL038C MYO2P19524 1574 aaKnown RBP8.39□□□□□ -1.07
NOT3YIL038C RIM101P33400 625 aa8.37□□□□□ -1.07
NOT3YIL038C ESP1Q03018 1630 aa8.34□□□□□ -1.08
NOT3YIL038C ATG2P53855 1592 aa8.33□□□□□ -1.08
NOT3YIL038C CHD1P32657 1468 aa8.32□□□□□ -1.08
NOT3YIL038C PEP1P32319 1579 aa8.31□□□□□ -1.08
NOT3YIL038C YPK9Q12697 1472 aa8.31□□□□□ -1.08
NOT3YIL038C LEU3P08638 886 aa8.27□□□□□ -1.09
NOT3YIL038C ECM5Q03214 1411 aa8.25□□□□□ -1.09
NOT3YIL038C OXP1P28273 1286 aa8.25□□□□□ -1.09
NOT3YIL038C MDS3P53094 1487 aa8.25□□□□□ -1.09
NOT3YIL038C POL1P13382 1468 aa8.23□□□□□ -1.09
NOT3YIL038C TAF2P23255 1407 aa8.23□□□□□ -1.09
NOT3YIL038C RPL17AP05740 184 aaKnown RBP8.23□□□□□ -1.09
NOT3YIL038C RPL17BP46990 184 aaKnown RBP8.23□□□□□ -1.09
NOT3YIL038C RPG1P38249 964 aaKnown RBP8.22□□□□□ -1.09
NOT3YIL038C RPO31P04051 1460 aa8.21□□□□□ -1.1
NOT3YIL038C SSP1P38871 571 aa8.21□□□□□ -1.1
NOT3YIL038C SCC2Q04002 1493 aa8.15□□□□□ -1.1
NOT3YIL038C ISW2Q08773 1120 aa8.13□□□□□ -1.11
NOT3YIL038C YTA7P40340 1379 aa8.13□□□□□ -1.11
NOT3YIL038C SKI3P17883 1432 aaKnown RBP8.13□□□□□ -1.11
NOT3YIL038C SMC4Q12267 1418 aa8.12□□□□□ -1.11
NOT3YIL038C YLR271WQ06152 274 aa8.12□□□□□ -1.11
NOT3YIL038C MYO4P32492 1471 aa8.11□□□□□ -1.11
NOT3YIL038C STU1P38198 1513 aa8.1□□□□□ -1.11
NOT3YIL038C TOP2P06786 1428 aaKnown RBP8.1□□□□□ -1.11
NOT3YIL038C YOR1P53049 1477 aa8.1□□□□□ -1.11
NOT3YIL038C PRI1P10363 409 aa8.08□□□□□ -1.12
NOT3YIL038C YCF1P39109 1515 aaKnown RBP8.07□□□□□ -1.12
NOT3YIL038C DMA2P53924 522 aa8.07□□□□□ -1.12
NOT3YIL038C RKR1Q04781 1562 aa8.03□□□□□ -1.12
NOT3YIL038C MMS22Q06164 1454 aa7.99□□□□□ -1.13
NOT3YIL038C UFD4P33202 1483 aa7.98□□□□□ -1.13
NOT3YIL038C BPT1P14772 1559 aa7.98□□□□□ -1.13
NOT3YIL038C CST9Q06032 482 aa7.96□□□□□ -1.14
NOT3YIL038C TY2B-LR1P0C2J3 1770 aa7.95□□□□□ -1.14
NOT3YIL038C TY2B-FP0CX63 1770 aa7.95□□□□□ -1.14
NOT3YIL038C TY2B-GR2P0CX64 1770 aa7.95□□□□□ -1.14
NOT3YIL038C TY2B-CP25384 1770 aa7.95□□□□□ -1.14
NOT3YIL038C TY2B-DR2Q03494 1770 aa7.95□□□□□ -1.14
NOT3YIL038C TY1B-DR1Q03855 1755 aa7.95□□□□□ -1.14
NOT3YIL038C TY2B-DR3Q07791 1770 aaKnown RBP7.95□□□□□ -1.14
NOT3YIL038C TY2B-OR1Q12113 1770 aa7.95□□□□□ -1.14
NOT3YIL038C TY2B-DR1Q12472 1770 aa7.95□□□□□ -1.14
NOT3YIL038C TY2B-OR2Q12501 1770 aa7.95□□□□□ -1.14
NOT3YIL038C TY1B-DR3Q99231 1755 aa7.91□□□□□ -1.14
NOT3YIL038C YKR023WP36119 530 aaKnown RBP7.91□□□□□ -1.14
NOT3YIL038C IFH1P39520 1085 aa7.89□□□□□ -1.15
NOT3YIL038C TY1B-BRQ12193 1756 aa7.89□□□□□ -1.15
NOT3YIL038C TY1B-GR3Q12316 1755 aa7.89□□□□□ -1.15
NOT3YIL038C TY1B-ORQ92393 1755 aa7.89□□□□□ -1.15
NOT3YIL038C TY2B-BQ12491 1770 aa7.88□□□□□ -1.15
NOT3YIL038C CDC25P04821 1589 aa7.88□□□□□ -1.15
NOT3YIL038C TY1B-HO13535 1793 aa7.87□□□□□ -1.15
NOT3YIL038C TY1B-DR5P0C2I2 1755 aa7.87□□□□□ -1.15
NOT3YIL038C TY1B-DR6P0C2I3 1755 aa7.87□□□□□ -1.15
NOT3YIL038C TY1B-LR2P0C2I5 1755 aa7.87□□□□□ -1.15
NOT3YIL038C TY1B-LR3P0C2I6 1755 aaKnown RBP7.87□□□□□ -1.15
NOT3YIL038C TY1B-PR1P0C2I9 1755 aaKnown RBP7.87□□□□□ -1.15
NOT3YIL038C TY1B-PR2P0C2J0 1756 aa7.87□□□□□ -1.15
NOT3YIL038C TY1B-PR3P0C2J1 1755 aaKnown RBP7.87□□□□□ -1.15
NOT3YIL038C TY1B-JR1P47098 1755 aa7.87□□□□□ -1.15
NOT3YIL038C TY1B-ML2Q03434 1755 aaKnown RBP7.87□□□□□ -1.15
NOT3YIL038C TY1B-ER1Q03612 1755 aa7.87□□□□□ -1.15
NOT3YIL038C TY1B-ML1Q04711 1755 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms