RNA–Protein interactions for RNA: YDR297W

SUR2, Transcript of Sphinganine C4-hydroxylase, yeastyeast

Gene SUR2, Length 1,050 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUR2YDR297W MTC1P47018 478 aaKnown RBP10.19□□□□□ -0.78
SUR2YDR297W DRS1P32892 752 aaKnown RBP9.62□□□□□ -0.87
SUR2YDR297W FAP1P53971 965 aa9.59□□□□□ -0.87
SUR2YDR297W PRY3P47033 881 aa9.07□□□□□ -0.96
SUR2YDR297W TFA1P36100 482 aa8.83□□□□□ -1
SUR2YDR297W RQC2Q12532 1038 aaKnown RBP8.75□□□□□ -1.01
SUR2YDR297W BFR2Q06631 534 aaKnown RBP8.73□□□□□ -1.01
SUR2YDR297W PRI1P10363 409 aa8.62□□□□□ -1.03
SUR2YDR297W YCK3P39962 524 aa8.52□□□□□ -1.05
SUR2YDR297W AAD16Q02895 342 aa8.51□□□□□ -1.05
SUR2YDR297W RPG1P38249 964 aaKnown RBP8.36□□□□□ -1.07
SUR2YDR297W ISW2Q08773 1120 aa8.35□□□□□ -1.07
SUR2YDR297W DIP2Q12220 943 aaPredicted RBP8.32□□□□□ -1.08
SUR2YDR297W HAA1Q12753 694 aaKnown RBP8.29□□□□□ -1.08
SUR2YDR297W TSR3Q12094 313 aaKnown RBP8.17□□□□□ -1.1
SUR2YDR297W AVT3P36062 692 aa8.08□□□□□ -1.12
SUR2YDR297W TAF7Q05021 590 aa8.05□□□□□ -1.12
SUR2YDR297W RSE1Q04693 1361 aaKnown RBP8.01□□□□□ -1.13
SUR2YDR297W SGS1P35187 1447 aa7.84□□□□□ -1.15
SUR2YDR297W RPL17AP05740 184 aaKnown RBP7.81□□□□□ -1.16
SUR2YDR297W RPL17BP46990 184 aaKnown RBP7.81□□□□□ -1.16
SUR2YDR297W INO80P53115 1489 aa7.8□□□□□ -1.16
SUR2YDR297W MRPL32P25348 183 aa7.73□□□□□ -1.17
SUR2YDR297W TCB3Q03640 1545 aaKnown RBP7.69□□□□□ -1.18
SUR2YDR297W REB1P21538 810 aa7.69□□□□□ -1.18
SUR2YDR297W MON2P48563 1636 aaPredicted RBP7.63□□□□□ -1.19
SUR2YDR297W TY1B-DR4Q07793 1604 aa7.62□□□□□ -1.19
SUR2YDR297W SPA2P23201 1466 aaKnown RBP7.58□□□□□ -1.2
SUR2YDR297W SPT21P35209 758 aa7.55□□□□□ -1.2
SUR2YDR297W LEO1P38439 464 aa7.55□□□□□ -1.2
SUR2YDR297W DMA1P38823 416 aa7.55□□□□□ -1.2
SUR2YDR297W CDC27P38042 758 aa7.51□□□□□ -1.21
SUR2YDR297W SSN2P38931 1420 aa7.51□□□□□ -1.21
SUR2YDR297W HSL1P34244 1518 aa7.47□□□□□ -1.21
SUR2YDR297W YKR023WP36119 530 aaKnown RBP7.47□□□□□ -1.21
SUR2YDR297W YGL015CP33199 130 aa7.45□□□□□ -1.22
SUR2YDR297W SWR1Q05471 1514 aa7.44□□□□□ -1.22
SUR2YDR297W SPT6P23615 1451 aaKnown RBP7.43□□□□□ -1.22
SUR2YDR297W BUD31P25337 157 aaPredicted RBP7.33□□□□□ -1.24
SUR2YDR297W HIR3P47171 1648 aa7.31□□□□□ -1.24
SUR2YDR297W DCD1P06773 312 aa7.31□□□□□ -1.24
SUR2YDR297W HOP09932 586 aa7.3□□□□□ -1.24
SUR2YDR297W TFC8Q12308 588 aa7.27□□□□□ -1.25
SUR2YDR297W RIM101P33400 625 aa7.24□□□□□ -1.25
SUR2YDR297W XRN1P22147 1528 aaKnown RBP7.23□□□□□ -1.25
SUR2YDR297W MAP2P38174 421 aaKnown RBP7.23□□□□□ -1.25
SUR2YDR297W KOG1P38873 1557 aa7.21□□□□□ -1.25
SUR2YDR297W REV3P14284 1504 aa7.19□□□□□ -1.26
SUR2YDR297W DNA2P38859 1522 aa7.19□□□□□ -1.26
SUR2YDR297W SIN3P22579 1536 aa7.16□□□□□ -1.26
SUR2YDR297W UBP10P53874 792 aaPredicted RBP7.14□□□□□ -1.27
SUR2YDR297W THO2P53552 1597 aaKnown RBP7.13□□□□□ -1.27
SUR2YDR297W SSK2P53599 1579 aa7.11□□□□□ -1.27
SUR2YDR297W LEU3P08638 886 aa7.1□□□□□ -1.27
SUR2YDR297W PTP3P40048 928 aa7.07□□□□□ -1.28
SUR2YDR297W BUD4P47136 1447 aa7.07□□□□□ -1.28
SUR2YDR297W OXP1P28273 1286 aa7.06□□□□□ -1.28
SUR2YDR297W SCY1P53009 804 aa7.05□□□□□ -1.28
SUR2YDR297W BCH2P36122 765 aa7.04□□□□□ -1.28
SUR2YDR297W MYO2P19524 1574 aaKnown RBP7.03□□□□□ -1.28
SUR2YDR297W ATG2P53855 1592 aa7.03□□□□□ -1.28
SUR2YDR297W ESP1Q03018 1630 aa7.02□□□□□ -1.29
SUR2YDR297W TAF2P23255 1407 aa6.99□□□□□ -1.29
SUR2YDR297W MDS3P53094 1487 aa6.98□□□□□ -1.29
SUR2YDR297W ECM5Q03214 1411 aa6.98□□□□□ -1.29
SUR2YDR297W PEP1P32319 1579 aa6.95□□□□□ -1.3
SUR2YDR297W SSP1P38871 571 aa6.93□□□□□ -1.3
SUR2YDR297W URN1Q06525 465 aaKnown RBP6.93□□□□□ -1.3
SUR2YDR297W SAS10Q12136 610 aaPredicted RBP6.93□□□□□ -1.3
SUR2YDR297W SIS1P25294 352 aaKnown RBP6.92□□□□□ -1.3
SUR2YDR297W YPK9Q12697 1472 aa6.92□□□□□ -1.3
SUR2YDR297W SLX5P32828 619 aaKnown RBP6.9□□□□□ -1.3
SUR2YDR297W RPN1P38764 993 aaKnown RBP6.9□□□□□ -1.3
SUR2YDR297W SKI3P17883 1432 aaKnown RBP6.9□□□□□ -1.31
SUR2YDR297W POL1P13382 1468 aa6.86□□□□□ -1.31
SUR2YDR297W EPS1P40557 701 aa6.86□□□□□ -1.31
SUR2YDR297W SCC2Q04002 1493 aa6.85□□□□□ -1.31
SUR2YDR297W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
SUR2YDR297W BDF1P35817 686 aa6.83□□□□□ -1.32
SUR2YDR297W AIM44Q99299 758 aa6.83□□□□□ -1.32
SUR2YDR297W RLF2Q12495 606 aa6.82□□□□□ -1.32
SUR2YDR297W RPO31P04051 1460 aa6.81□□□□□ -1.32
SUR2YDR297W TGL3P40308 642 aa6.81□□□□□ -1.32
SUR2YDR297W STU1P38198 1513 aa6.81□□□□□ -1.32
SUR2YDR297W RKR1Q04781 1562 aa6.8□□□□□ -1.32
SUR2YDR297W CHD1P32657 1468 aa6.79□□□□□ -1.32
SUR2YDR297W DMA2P53924 522 aa6.78□□□□□ -1.32
SUR2YDR297W TIF4632P39936 914 aaKnown RBP6.77□□□□□ -1.33
SUR2YDR297W YAH1Q12184 172 aaKnown RBP6.77□□□□□ -1.33
SUR2YDR297W YOR1P53049 1477 aa6.77□□□□□ -1.33
SUR2YDR297W YCF1P39109 1515 aaKnown RBP6.76□□□□□ -1.33
SUR2YDR297W YIL055CP40523 627 aaKnown RBP6.76□□□□□ -1.33
SUR2YDR297W UFD4P33202 1483 aa6.76□□□□□ -1.33
SUR2YDR297W MMS22Q06164 1454 aa6.76□□□□□ -1.33
SUR2YDR297W TY2B-LR1P0C2J3 1770 aa6.74□□□□□ -1.33
SUR2YDR297W TY2B-FP0CX63 1770 aa6.74□□□□□ -1.33
SUR2YDR297W TY2B-GR2P0CX64 1770 aa6.74□□□□□ -1.33
SUR2YDR297W TY2B-CP25384 1770 aa6.74□□□□□ -1.33
SUR2YDR297W TY2B-DR2Q03494 1770 aa6.74□□□□□ -1.33
SUR2YDR297W TY1B-DR1Q03855 1755 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms