RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C MTC1P47018 478 aaKnown RBP12.48□□□□□ -0.41
VPS61YDR136C DRS1P32892 752 aaKnown RBP12.37□□□□□ -0.43
VPS61YDR136C SGS1P35187 1447 aa10.7□□□□□ -0.7
VPS61YDR136C BFR2Q06631 534 aaKnown RBP10.65□□□□□ -0.7
VPS61YDR136C SPA2P23201 1466 aaKnown RBP10.59□□□□□ -0.71
VPS61YDR136C DIP2Q12220 943 aaPredicted RBP10.58□□□□□ -0.72
VPS61YDR136C INO80P53115 1489 aa10.53□□□□□ -0.72
VPS61YDR136C SSN2P38931 1420 aa10.41□□□□□ -0.74
VPS61YDR136C FAP1P53971 965 aa10.41□□□□□ -0.74
VPS61YDR136C AVT3P36062 692 aa10.38□□□□□ -0.75
VPS61YDR136C TCB3Q03640 1545 aaKnown RBP10.26□□□□□ -0.77
VPS61YDR136C ISW2Q08773 1120 aa10.23□□□□□ -0.77
VPS61YDR136C TY1B-DR4Q07793 1604 aa10.16□□□□□ -0.78
VPS61YDR136C PRI1P10363 409 aa10.1□□□□□ -0.79
VPS61YDR136C RSE1Q04693 1361 aaKnown RBP10.05□□□□□ -0.8
VPS61YDR136C RPG1P38249 964 aaKnown RBP10.03□□□□□ -0.8
VPS61YDR136C HSL1P34244 1518 aa10.01□□□□□ -0.81
VPS61YDR136C AAD16Q02895 342 aa9.95□□□□□ -0.82
VPS61YDR136C SPT6P23615 1451 aaKnown RBP9.91□□□□□ -0.82
VPS61YDR136C TFA1P36100 482 aa9.91□□□□□ -0.82
VPS61YDR136C HIR3P47171 1648 aa9.82□□□□□ -0.84
VPS61YDR136C MON2P48563 1636 aaPredicted RBP9.82□□□□□ -0.84
VPS61YDR136C XRN1P22147 1528 aaKnown RBP9.74□□□□□ -0.85
VPS61YDR136C SWR1Q05471 1514 aa9.74□□□□□ -0.85
VPS61YDR136C PRY3P47033 881 aa9.73□□□□□ -0.85
VPS61YDR136C SIN3P22579 1536 aa9.72□□□□□ -0.85
VPS61YDR136C REV3P14284 1504 aa9.7□□□□□ -0.86
VPS61YDR136C THO2P53552 1597 aaKnown RBP9.7□□□□□ -0.86
VPS61YDR136C SKI3P17883 1432 aaKnown RBP9.69□□□□□ -0.86
VPS61YDR136C RPL17AP05740 184 aaKnown RBP9.66□□□□□ -0.86
VPS61YDR136C RPL17BP46990 184 aaKnown RBP9.66□□□□□ -0.86
VPS61YDR136C SSK2P53599 1579 aa9.65□□□□□ -0.86
VPS61YDR136C CHD1P32657 1468 aa9.59□□□□□ -0.87
VPS61YDR136C REB1P21538 810 aa9.59□□□□□ -0.87
VPS61YDR136C TSR3Q12094 313 aaKnown RBP9.56□□□□□ -0.88
VPS61YDR136C MYO2P19524 1574 aaKnown RBP9.54□□□□□ -0.88
VPS61YDR136C MMS22Q06164 1454 aa9.53□□□□□ -0.88
VPS61YDR136C ESP1Q03018 1630 aa9.53□□□□□ -0.88
VPS61YDR136C TAF2P23255 1407 aa9.46□□□□□ -0.9
VPS61YDR136C POL1P13382 1468 aa9.4□□□□□ -0.9
VPS61YDR136C ATG2P53855 1592 aa9.39□□□□□ -0.91
VPS61YDR136C STU1P38198 1513 aa9.39□□□□□ -0.91
VPS61YDR136C YPK9Q12697 1472 aa9.34□□□□□ -0.91
VPS61YDR136C BUD4P47136 1447 aa9.33□□□□□ -0.92
VPS61YDR136C KOG1P38873 1557 aa9.33□□□□□ -0.92
VPS61YDR136C SPT21P35209 758 aa9.28□□□□□ -0.92
VPS61YDR136C ECM5Q03214 1411 aa9.27□□□□□ -0.93
VPS61YDR136C BPT1P14772 1559 aa9.27□□□□□ -0.93
VPS61YDR136C YTA7P40340 1379 aa9.26□□□□□ -0.93
VPS61YDR136C RKR1Q04781 1562 aa9.26□□□□□ -0.93
VPS61YDR136C DNA2P38859 1522 aa9.26□□□□□ -0.93
VPS61YDR136C MYO4P32492 1471 aa9.25□□□□□ -0.93
VPS61YDR136C UFD4P33202 1483 aa9.24□□□□□ -0.93
VPS61YDR136C YOR1P53049 1477 aa9.24□□□□□ -0.93
VPS61YDR136C MRPL32P25348 183 aa9.24□□□□□ -0.93
VPS61YDR136C SCC2Q04002 1493 aa9.23□□□□□ -0.93
VPS61YDR136C PEP1P32319 1579 aa9.23□□□□□ -0.93
VPS61YDR136C HAA1Q12753 694 aaKnown RBP9.22□□□□□ -0.93
VPS61YDR136C RPO31P04051 1460 aa9.18□□□□□ -0.94
VPS61YDR136C MDS3P53094 1487 aa9.18□□□□□ -0.94
VPS61YDR136C TRM732Q03496 1420 aa9.14□□□□□ -0.95
VPS61YDR136C SMC4Q12267 1418 aa9.14□□□□□ -0.95
VPS61YDR136C RIM101P33400 625 aa9.13□□□□□ -0.95
VPS61YDR136C YCF1P39109 1515 aaKnown RBP9.12□□□□□ -0.95
VPS61YDR136C YCK3P39962 524 aa9.12□□□□□ -0.95
VPS61YDR136C TOP2P06786 1428 aaKnown RBP9.12□□□□□ -0.95
VPS61YDR136C TY2B-LR1P0C2J3 1770 aa9.12□□□□□ -0.95
VPS61YDR136C TY2B-FP0CX63 1770 aa9.12□□□□□ -0.95
VPS61YDR136C TY2B-GR2P0CX64 1770 aa9.12□□□□□ -0.95
VPS61YDR136C TY2B-CP25384 1770 aa9.12□□□□□ -0.95
VPS61YDR136C TY2B-DR2Q03494 1770 aa9.12□□□□□ -0.95
VPS61YDR136C TY1B-DR1Q03855 1755 aa9.12□□□□□ -0.95
VPS61YDR136C TY2B-DR3Q07791 1770 aaKnown RBP9.12□□□□□ -0.95
VPS61YDR136C TY2B-OR1Q12113 1770 aa9.12□□□□□ -0.95
VPS61YDR136C TY2B-DR1Q12472 1770 aa9.12□□□□□ -0.95
VPS61YDR136C TY2B-OR2Q12501 1770 aa9.12□□□□□ -0.95
VPS61YDR136C TY1B-DR3Q99231 1755 aa9.11□□□□□ -0.95
VPS61YDR136C NUP170P38181 1502 aa9.1□□□□□ -0.95
VPS61YDR136C SNQ2P32568 1501 aaKnown RBP9.08□□□□□ -0.96
VPS61YDR136C MLP2P40457 1679 aa9.07□□□□□ -0.96
VPS61YDR136C TY2B-BQ12491 1770 aa9.04□□□□□ -0.96
VPS61YDR136C IKI3Q06706 1349 aaKnown RBP9.03□□□□□ -0.96
VPS61YDR136C SAS10Q12136 610 aaPredicted RBP9.02□□□□□ -0.97
VPS61YDR136C SPP41P38904 1435 aa9□□□□□ -0.97
VPS61YDR136C YKR023WP36119 530 aaKnown RBP9□□□□□ -0.97
VPS61YDR136C PDR15Q04182 1529 aaKnown RBP9□□□□□ -0.97
VPS61YDR136C ULS1Q08562 1619 aa8.99□□□□□ -0.97
VPS61YDR136C TY1B-HO13535 1793 aa8.96□□□□□ -0.97
VPS61YDR136C TY1B-DR5P0C2I2 1755 aa8.96□□□□□ -0.97
VPS61YDR136C TY1B-DR6P0C2I3 1755 aa8.96□□□□□ -0.97
VPS61YDR136C TY1B-LR2P0C2I5 1755 aa8.96□□□□□ -0.97
VPS61YDR136C TY1B-LR3P0C2I6 1755 aaKnown RBP8.96□□□□□ -0.97
VPS61YDR136C TY1B-PR1P0C2I9 1755 aaKnown RBP8.96□□□□□ -0.97
VPS61YDR136C TY1B-PR2P0C2J0 1756 aa8.96□□□□□ -0.97
VPS61YDR136C TY1B-PR3P0C2J1 1755 aaKnown RBP8.96□□□□□ -0.97
VPS61YDR136C TY1B-JR1P47098 1755 aa8.96□□□□□ -0.97
VPS61YDR136C TY1B-ML2Q03434 1755 aaKnown RBP8.96□□□□□ -0.97
VPS61YDR136C TY1B-ER1Q03612 1755 aa8.96□□□□□ -0.97
VPS61YDR136C TY1B-ML1Q04711 1755 aaKnown RBP8.96□□□□□ -0.97
VPS61YDR136C TY1B-GR2Q12269 1755 aa8.96□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms