RNA–Protein interactions for RNA: ENST00000314888.9

TLN1-201, Transcript of talin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TLN1, Length 8,823 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TLN1-201ENST00000314888 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.92■□□□□ 0.469e-7■■■■■ 108.3
TLN1-201ENST00000314888 SF3B1O75533 1304 aaKnown RBP eCLIP15.07■□□□□ 01e-6■■■■■ 79.8
TLN1-201ENST00000314888 PTBP1P26599 531 aaKnown RBP eCLIP13.14□□□□□ -0.311e-8■■■■■ 75
TLN1-201ENST00000314888 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.46□□□□□ -0.264e-10■■■■■ 60.5
TLN1-201ENST00000314888 QKIQ96PU8 341 aaKnown RBP eCLIP15.2■□□□□ 0.021e-9■■■■■ 52.1
TLN1-201ENST00000314888 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.12■□□□□ 0.014e-6■■■■■ 49.2
TLN1-201ENST00000314888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.54■□□□□ 0.081e-8■■■■■ 40.1
TLN1-201ENST00000314888 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.131e-12■■■■■ 34.8
TLN1-201ENST00000314888 EFTUD2Q15029 972 aaKnown RBP eCLIP15.46■□□□□ 0.071e-6■■■■■ 32.3
TLN1-201ENST00000314888 PCBP1Q15365 356 aaKnown RBP eCLIP13.95□□□□□ -0.183e-7■■■■■ 31.5
TLN1-201ENST00000314888 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.77□□□□□ -0.374e-7■■■■■ 30.5
TLN1-201ENST00000314888 RBM22Q9NW64 420 aaKnown RBP eCLIP14.44□□□□□ -0.13e-6■■■■■ 30.2
TLN1-201ENST00000314888 FMR1Q06787 632 aaKnown RBP eCLIP14.23□□□□□ -0.132e-9■■■■■ 28.8
TLN1-201ENST00000314888 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.7□□□□□ -0.065e-8■■■■■ 27.9
TLN1-201ENST00000314888 GTF2F1P35269 517 aaKnown RBP eCLIP16.57■□□□□ 0.249e-7■■■■■ 27.6
TLN1-201ENST00000314888 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.71■□□□□ 0.117e-6■■■■■ 27.5
TLN1-201ENST00000314888 TARDBPQ13148 414 aaKnown RBP eCLIP14.13□□□□□ -0.159e-8■■■■■ 26.8
TLN1-201ENST00000314888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.05■□□□□ -03e-7■■■■□ 26.5
TLN1-201ENST00000314888 FTOQ9C0B1 505 aaKnown RBP eCLIP15.36■□□□□ 0.053e-6■■■■□ 26.2
TLN1-201ENST00000314888 NIPBLQ6KC79 2804 aaeCLIP7.36□□□□□ -1.231e-6■■■■□ 26.2
TLN1-201ENST00000314888 NOLC1Q14978 699 aaKnown RBP eCLIP15.98■□□□□ 0.158e-7■■■■□ 24.6
TLN1-201ENST00000314888 SF3B4Q15427 424 aaKnown RBP eCLIP13.74□□□□□ -0.214e-7■■■■□ 23.7
TLN1-201ENST00000314888 RPS3P23396 243 aaKnown RBP eCLIP14.01□□□□□ -0.175e-7■■■■□ 23.6
TLN1-201ENST00000314888 AQRO60306 1485 aaKnown RBP eCLIP14.79□□□□□ -0.041e-6■■■■□ 23.5
TLN1-201ENST00000314888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.67□□□□□ -0.382e-7■■■■□ 23.3
TLN1-201ENST00000314888 HNRNPLP14866 589 aaKnown RBP eCLIP14.12□□□□□ -0.156e-7■■■■□ 22.6
TLN1-201ENST00000314888 CDC40O60508 579 aaKnown RBP eCLIP15.27■□□□□ 0.033e-6■■■■□ 22.5
TLN1-201ENST00000314888 PCBP2Q15366 365 aaKnown RBP eCLIP13.87□□□□□ -0.197e-7■■■■□ 21.4
TLN1-201ENST00000314888 HNRNPKP61978 463 aaKnown RBP eCLIP14.08□□□□□ -0.161e-6■■■■□ 21.1
TLN1-201ENST00000314888 G3BP1Q13283 466 aaKnown RBP eCLIP17.06■□□□□ 0.323e-7■■■■□ 20.6
TLN1-201ENST00000314888 TIA1P31483 386 aaKnown RBP eCLIP13.49□□□□□ -0.258e-10■■■■□ 20.1
TLN1-201ENST00000314888 FXR1P51114 621 aaKnown RBP eCLIP14.27□□□□□ -0.132e-6■■■■□ 20.1
TLN1-201ENST00000314888 SF3A3Q12874 501 aaKnown RBP eCLIP15.85■□□□□ 0.131e-6■■■■□ 20.1
TLN1-201ENST00000314888 AARSP49588 968 aaKnown RBP eCLIP15.55■□□□□ 0.083e-6■■■■□ 19.9
TLN1-201ENST00000314888 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.66□□□□□ -0.065e-7■■■■□ 19.8
TLN1-201ENST00000314888 EIF4G2P78344 907 aaKnown RBP eCLIP18.3■□□□□ 0.522e-7■■■■□ 19.6
TLN1-201ENST00000314888 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■■■□□ 19
TLN1-201ENST00000314888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.83□□□□□ -0.048e-6■■■□□ 18.6
TLN1-201ENST00000314888 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.99□□□□□ -0.175e-8■■■□□ 18
TLN1-201ENST00000314888 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■□□ 17.5
TLN1-201ENST00000314888 SND1Q7KZF4 910 aaKnown RBP eCLIP15.87■□□□□ 0.132e-8■■■□□ 17.3
TLN1-201ENST00000314888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.533e-7■■■□□ 17.1
TLN1-201ENST00000314888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.31■□□□□ 0.27e-9■■■□□ 17
TLN1-201ENST00000314888 U2AF2P26368 475 aaKnown RBP eCLIP15.72■□□□□ 0.111e-7■■■□□ 16.8
TLN1-201ENST00000314888 DDX3XO00571 662 aaKnown RBP eCLIP14.54□□□□□ -0.083e-13■■■□□ 16.5
TLN1-201ENST00000314888 PPIGQ13427 754 aaKnown RBP eCLIP14.02□□□□□ -0.161e-6■■■□□ 15.6
TLN1-201ENST00000314888 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.5■□□□□ 0.072e-7■■■□□ 15.6
TLN1-201ENST00000314888 SMNDC1O75940 238 aaKnown RBP eCLIP14.85□□□□□ -0.032e-8■■■□□ 15.6
TLN1-201ENST00000314888 METAP2P50579 478 aaKnown RBP eCLIP16.09■□□□□ 0.171e-6■■□□□ 14.3
TLN1-201ENST00000314888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.41■□□□□ 0.226e-8■■□□□ 14.3
TLN1-201ENST00000314888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.69■□□□□ 0.18e-6■■□□□ 13.6
TLN1-201ENST00000314888 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.14□□□□□ -0.154e-7■■□□□ 13.3
TLN1-201ENST00000314888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.81□□□□□ -0.049e-9■■□□□ 12.9
TLN1-201ENST00000314888 LARP4Q71RC2 724 aaKnown RBP eCLIP13.46□□□□□ -0.259e-7■■□□□ 12.8
TLN1-201ENST00000314888 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.61■□□□□ 0.097e-8■■□□□ 11.9
TLN1-201ENST00000314888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.2□□□□□ -0.149e-7■■□□□ 11.5
TLN1-201ENST00000314888 PUM1Q14671 1186 aaKnown RBP eCLIP14.32□□□□□ -0.128e-7■■□□□ 11.5
TLN1-201ENST00000314888 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.43■□□□□ 0.225e-7■■□□□ 11.4
TLN1-201ENST00000314888 SUB1P53999 127 aaKnown RBP eCLIP13.58□□□□□ -0.246e-7■■□□□ 11.4
TLN1-201ENST00000314888 YBX3P16989 372 aaKnown RBP eCLIP14.27□□□□□ -0.126e-7■□□□□ 11.1
TLN1-201ENST00000314888 TRA2AQ13595 282 aaKnown RBP eCLIP12.51□□□□□ -0.413e-6■□□□□ 11
TLN1-201ENST00000314888 DDX6P26196 483 aaKnown RBP eCLIP14.34□□□□□ -0.112e-6■□□□□ 10.7
TLN1-201ENST00000314888 NCBP2P52298 156 aaKnown RBP eCLIP14.04□□□□□ -0.164e-6■□□□□ 10
TLN1-201ENST00000314888 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.61□□□□□ -0.074e-8■□□□□ 9.9
TLN1-201ENST00000314888 EIF3DO15371 548 aaKnown RBP eCLIP15.67■□□□□ 0.14e-6■□□□□ 9.6
TLN1-201ENST00000314888 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.5□□□□□ -0.091e-6■□□□□ 9.6
TLN1-201ENST00000314888 RBFOX2O43251 390 aaKnown RBP eCLIP12.96□□□□□ -0.343e-7■□□□□ 9.5
TLN1-201ENST00000314888 ZNF622Q969S3 477 aaKnown RBP eCLIP15.91■□□□□ 0.143e-9■□□□□ 9.4
TLN1-201ENST00000314888 PABPC4Q13310 644 aaKnown RBP eCLIP15.38■□□□□ 0.054e-6■□□□□ 9.4
TLN1-201ENST00000314888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.61□□□□□ -0.235e-7■□□□□ 9.2
TLN1-201ENST00000314888 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.168e-7■□□□□ 9.2
Retrieved 71 of 71 RNA–protein pairs in 15.3 ms