RNA–Protein interactions for RNA: YDR297W

SUR2, Transcript of Sphinganine C4-hydroxylase, yeastyeast

Gene SUR2, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUR2YDR297W IOC3P43596 787 aa5.51□□□□□ -1.53
SUR2YDR297W RRP46P53256 223 aaPredicted RBP5.51□□□□□ -1.53
SUR2YDR297W HIM1Q06674 414 aa5.51□□□□□ -1.53
SUR2YDR297W CFT2Q12102 859 aaPredicted RBP5.51□□□□□ -1.53
SUR2YDR297W LSO1Q3E827 93 aa5.51□□□□□ -1.53
SUR2YDR297W VPS35P34110 944 aa5.5□□□□□ -1.53
SUR2YDR297W TPS3P38426 1054 aaKnown RBP5.5□□□□□ -1.53
SUR2YDR297W MNN1P39106 762 aa5.5□□□□□ -1.53
SUR2YDR297W BOL3P39724 118 aa5.5□□□□□ -1.53
SUR2YDR297W PAP2P53632 584 aaKnown RBP5.5□□□□□ -1.53
SUR2YDR297W UFD2P54860 961 aa5.5□□□□□ -1.53
SUR2YDR297W TRS120Q04183 1289 aa5.5□□□□□ -1.53
SUR2YDR297W YDR341CQ05506 607 aaKnown RBP5.5□□□□□ -1.53
SUR2YDR297W FRA1Q07825 749 aa5.5□□□□□ -1.53
SUR2YDR297W TUM1Q08686 304 aaKnown RBP5.5□□□□□ -1.53
SUR2YDR297W SSF2Q12153 453 aaPredicted RBP5.5□□□□□ -1.53
SUR2YDR297W KAR1P11927 433 aa5.49□□□□□ -1.53
SUR2YDR297W SEC9P40357 651 aa5.49□□□□□ -1.53
SUR2YDR297W BUD6P41697 788 aa5.49□□□□□ -1.53
SUR2YDR297W IES1P43579 692 aa5.49□□□□□ -1.53
SUR2YDR297W SAM37P50110 327 aa5.49□□□□□ -1.53
SUR2YDR297W ACS2P52910 683 aaKnown RBP5.49□□□□□ -1.53
SUR2YDR297W YLR257WQ06146 321 aaKnown RBP5.49□□□□□ -1.53
SUR2YDR297W APL5Q08951 932 aaKnown RBP5.49□□□□□ -1.53
SUR2YDR297W NOP58Q12499 511 aaKnown RBP5.49□□□□□ -1.53
SUR2YDR297W YRF1-4O13559 1382 aa5.48□□□□□ -1.53
SUR2YDR297W SIR4P11978 1358 aa5.48□□□□□ -1.53
SUR2YDR297W TY4B-PA0A0B7P3V8 1104 aa5.48□□□□□ -1.53
SUR2YDR297W TEC1P18412 486 aa5.48□□□□□ -1.53
SUR2YDR297W SUI2P20459 304 aaKnown RBP5.48□□□□□ -1.53
SUR2YDR297W SDH2P21801 266 aa5.48□□□□□ -1.53
SUR2YDR297W MRC1P25588 1096 aa5.48□□□□□ -1.53
SUR2YDR297W PWP2P25635 923 aaKnown RBP5.48□□□□□ -1.53
SUR2YDR297W RPT1P33299 467 aaKnown RBP5.48□□□□□ -1.53
SUR2YDR297W PET112P33893 541 aa5.48□□□□□ -1.53
SUR2YDR297W PMC1P38929 1173 aaPredicted RBP5.48□□□□□ -1.53
SUR2YDR297W ROM1P53046 1155 aa5.48□□□□□ -1.53
SUR2YDR297W YGR130CP53278 816 aa5.48□□□□□ -1.53
SUR2YDR297W GDE1Q02979 1223 aa5.48□□□□□ -1.53
SUR2YDR297W IMH1Q06704 911 aaKnown RBP5.48□□□□□ -1.53
SUR2YDR297W PUS1Q12211 544 aaKnown RBP5.48□□□□□ -1.53
SUR2YDR297W RVB2Q12464 471 aaKnown RBP5.48□□□□□ -1.53
SUR2YDR297W TY4A-HQ6Q5P6 413 aa5.48□□□□□ -1.53
SUR2YDR297W FRT1Q99332 602 aa5.48□□□□□ -1.53
SUR2YDR297W RPA135P22138 1203 aaKnown RBP5.47□□□□□ -1.53
SUR2YDR297W PRD1P25375 712 aa5.47□□□□□ -1.53
SUR2YDR297W PBP2P38151 413 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
SUR2YDR297W TAF1P46677 1066 aa5.47□□□□□ -1.53
SUR2YDR297W NNF2P53253 936 aa5.47□□□□□ -1.53
SUR2YDR297W SRC1Q03707 834 aa5.47□□□□□ -1.53
SUR2YDR297W YOL057WQ08225 711 aa5.47□□□□□ -1.53
SUR2YDR297W YLR125WQ12138 136 aa5.47□□□□□ -1.53
SUR2YDR297W TY1B-AO13527 1196 aaKnown RBP5.46□□□□□ -1.54
SUR2YDR297W PHO4P07270 312 aaKnown RBP5.46□□□□□ -1.54
SUR2YDR297W OPI1P21957 404 aa5.46□□□□□ -1.54
SUR2YDR297W SPC110P32380 944 aa5.46□□□□□ -1.54
SUR2YDR297W ISF1P32488 338 aa5.46□□□□□ -1.54
SUR2YDR297W FYV10P40492 516 aa5.46□□□□□ -1.54
SUR2YDR297W VPS4P52917 437 aa5.46□□□□□ -1.54
SUR2YDR297W BDF2Q07442 638 aa5.46□□□□□ -1.54
SUR2YDR297W MCM1P11746 286 aa5.45□□□□□ -1.54
SUR2YDR297W MUM2P38236 366 aa5.45□□□□□ -1.54
SUR2YDR297W CIC1P38779 376 aaKnown RBP5.45□□□□□ -1.54
SUR2YDR297W HOS2P53096 452 aaPredicted RBP5.45□□□□□ -1.54
SUR2YDR297W YGR122WP53272 402 aa5.45□□□□□ -1.54
SUR2YDR297W THI22Q06490 572 aa5.45□□□□□ -1.54
SUR2YDR297W CLF1Q12309 687 aaPredicted RBP5.45□□□□□ -1.54
SUR2YDR297W RSF2P46974 1380 aa5.44□□□□□ -1.54
SUR2YDR297W RAS1P01119 309 aa5.44□□□□□ -1.54
SUR2YDR297W PRP5P21372 849 aaPredicted RBP5.44□□□□□ -1.54
SUR2YDR297W PRP45P28004 379 aaPredicted RBP5.44□□□□□ -1.54
SUR2YDR297W TPD3P31383 635 aa5.44□□□□□ -1.54
SUR2YDR297W NPL4P33755 580 aa5.44□□□□□ -1.54
SUR2YDR297W AKL1P38080 1108 aaKnown RBP5.44□□□□□ -1.54
SUR2YDR297W SOH1P38633 127 aa5.44□□□□□ -1.54
SUR2YDR297W FAF1P40546 346 aaPredicted RBP5.44□□□□□ -1.54
SUR2YDR297W SAP155P43612 1002 aa5.44□□□□□ -1.54
SUR2YDR297W MSB3P48566 633 aaPredicted RBP5.44□□□□□ -1.54
SUR2YDR297W HEF3P53978 1044 aaKnown RBP5.44□□□□□ -1.54
SUR2YDR297W NAN1Q02931 896 aaKnown RBP5.44□□□□□ -1.54
SUR2YDR297W RGA2Q06407 1009 aa5.44□□□□□ -1.54
SUR2YDR297W HSP42Q12329 375 aa5.44□□□□□ -1.54
SUR2YDR297W ERP4Q12450 207 aa5.44□□□□□ -1.54
SUR2YDR297W NKP1Q12493 238 aa5.44□□□□□ -1.54
SUR2YDR297W PHO8P11491 566 aa5.43□□□□□ -1.54
SUR2YDR297W NFU1P32860 256 aa5.43□□□□□ -1.54
SUR2YDR297W UBP12P39538 1254 aa5.43□□□□□ -1.54
SUR2YDR297W NUP82P40368 713 aa5.43□□□□□ -1.54
SUR2YDR297W STR2P47164 639 aa5.43□□□□□ -1.54
SUR2YDR297W RPA14P50106 137 aa5.43□□□□□ -1.54
SUR2YDR297W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SUR2YDR297W COG4Q06096 861 aa5.43□□□□□ -1.54
SUR2YDR297W RTT109Q07794 436 aa5.43□□□□□ -1.54
SUR2YDR297W ALR1Q08269 859 aa5.43□□□□□ -1.54
SUR2YDR297W SLM3Q12093 417 aa5.43□□□□□ -1.54
SUR2YDR297W YRR1Q12172 810 aa5.43□□□□□ -1.54
SUR2YDR297W UBP1P25037 809 aa5.42□□□□□ -1.54
SUR2YDR297W RAD51P25454 400 aa5.42□□□□□ -1.54
SUR2YDR297W CBF5P33322 483 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SUR2YDR297W VPS24P36095 224 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms