Protein–RNA interactions for Protein: Q99332

FRT1, Protein HPH1, yeastyeast

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FRT1Q99332 YML009W-BYML009W-B 477 nt20.56■□□□□ 0.88
FRT1Q99332 NSR1YGR159C 1245 nt20.3■□□□□ 0.84
FRT1Q99332 NOP1YDL014W 984 nt19.98■□□□□ 0.79
FRT1Q99332 YKL036CYKL036C 393 nt18.46■□□□□ 0.55
FRT1Q99332 MDJ1YFL016C 1536 nt18.02■□□□□ 0.47
FRT1Q99332 Q0297Q0297 156 nt17.44■□□□□ 0.38
FRT1Q99332 SRX1YKL086W 384 nt17.42■□□□□ 0.38
FRT1Q99332 YJL027CYJL027C 417 nt17.28■□□□□ 0.36
FRT1Q99332 SCS3YGL126W 1143 nt16.81■□□□□ 0.28
FRT1Q99332 YCR051WYCR051W 669 nt16.6■□□□□ 0.25
FRT1Q99332 YOL085CYOL085C 342 nt15.96■□□□□ 0.15
FRT1Q99332 DBP2YNL112W 1641 nt15.89■□□□□ 0.13
FRT1Q99332 PKP1YIL042C 1185 nt15.77■□□□□ 0.12
FRT1Q99332 TRN1tP(UGG)A 72 nt15.71■□□□□ 0.11
FRT1Q99332 SUF9tP(UGG)F 72 nt15.71■□□□□ 0.11
FRT1Q99332 SUF8tP(UGG)H 72 nt15.71■□□□□ 0.11
FRT1Q99332 tP(UGG)LtP(UGG)L 72 nt15.71■□□□□ 0.11
FRT1Q99332 SUF7tP(UGG)M 72 nt15.71■□□□□ 0.11
FRT1Q99332 tP(UGG)N1tP(UGG)N1 72 nt15.71■□□□□ 0.11
FRT1Q99332 tP(UGG)N2tP(UGG)N2 72 nt15.71■□□□□ 0.11
FRT1Q99332 tP(UGG)O1tP(UGG)O1 72 nt15.71■□□□□ 0.11
FRT1Q99332 SUF11tP(UGG)O2 72 nt15.71■□□□□ 0.11
FRT1Q99332 RPP1BYDL130W 321 nt15.68■□□□□ 0.1
FRT1Q99332 CCC1YLR220W 969 nt15.64■□□□□ 0.09
FRT1Q99332 Q0182Q0182 405 nt15.36■□□□□ 0.05
FRT1Q99332 YBR190WYBR190W 312 nt15.32■□□□□ 0.04
FRT1Q99332 MOT3YMR070W 1473 nt15.14■□□□□ 0.01
FRT1Q99332 RTC3YHR087W 336 nt15.08■□□□□ 0
FRT1Q99332 RVS167YDR388W 1449 nt15.07■□□□□ 0
FRT1Q99332 ATS1YAL020C 1002 nt15.04■□□□□ -0
FRT1Q99332 PET122YER153C 765 nt14.98□□□□□ -0.01
FRT1Q99332 SCJ1YMR214W 1134 nt14.92□□□□□ -0.02
FRT1Q99332 tP(UGG)O3tP(UGG)O3 72 nt14.89□□□□□ -0.03
FRT1Q99332 SCR1SCR1 522 nt14.89□□□□□ -0.03
FRT1Q99332 RRN5YLR141W 1092 nt14.55□□□□□ -0.08
FRT1Q99332 SHR5YOL110W 714 nt14.51□□□□□ -0.09
FRT1Q99332 YDJ1YNL064C 1230 nt14.38□□□□□ -0.11
FRT1Q99332 RSB1YOR049C 1065 nt14.32□□□□□ -0.12
FRT1Q99332 YER088W-BYER088W-B 147 nt14.25□□□□□ -0.13
FRT1Q99332 DEP1YAL013W 1218 nt14.13□□□□□ -0.15
FRT1Q99332 GAR1YHR089C 618 nt14.12□□□□□ -0.15
FRT1Q99332 URN1YPR152C 1398 nt14.09□□□□□ -0.15
FRT1Q99332 SSA3YBL075C 1950 nt13.96□□□□□ -0.18
FRT1Q99332 RPN10YHR200W 807 nt13.92□□□□□ -0.18
FRT1Q99332 PST2YDR032C 597 nt13.89□□□□□ -0.19
FRT1Q99332 YNL208WYNL208W 600 nt13.87□□□□□ -0.19
FRT1Q99332 PUT4YOR348C 1884 nt13.84□□□□□ -0.19
FRT1Q99332 OPI9YLR338W 858 nt13.83□□□□□ -0.2
FRT1Q99332 SAH1YER043C 1350 nt13.76□□□□□ -0.21
FRT1Q99332 ARE1YCR048W 1833 nt13.62□□□□□ -0.23
FRT1Q99332 TIR1YER011W 765 nt13.62□□□□□ -0.23
FRT1Q99332 YHR049C-AYHR049C-A 297 nt13.5□□□□□ -0.25
FRT1Q99332 POA1YBR022W 534 nt13.47□□□□□ -0.25
FRT1Q99332 PUN1YLR414C 792 nt13.46□□□□□ -0.25
FRT1Q99332 YJR018WYJR018W 363 nt13.44□□□□□ -0.26
FRT1Q99332 YKL097CYKL097C 411 nt13.43□□□□□ -0.26
FRT1Q99332 SSA1YAL005C 1929 nt13.42□□□□□ -0.26
FRT1Q99332 SHU1YHL006C 453 nt13.34□□□□□ -0.27
FRT1Q99332 PTC2YER089C 1395 nt13.3□□□□□ -0.28
FRT1Q99332 BUD23YCR047C 828 nt13.24□□□□□ -0.29
FRT1Q99332 RPP2BYDR382W 333 nt13.23□□□□□ -0.29
FRT1Q99332 SRB2YHR041C 633 nt13.16□□□□□ -0.3
FRT1Q99332 YAL037C-BYAL037C-B 975 nt13.16□□□□□ -0.3
FRT1Q99332 YJR120WYJR120W 351 nt13.15□□□□□ -0.3
FRT1Q99332 BSC6YOL137W 1494 nt13.15□□□□□ -0.3
FRT1Q99332 NAB2YGL122C 1578 nt13.11□□□□□ -0.31
FRT1Q99332 WWM1YFL010C 636 nt13.03□□□□□ -0.32
FRT1Q99332 FPR4YLR449W 1179 nt13□□□□□ -0.33
FRT1Q99332 YGR021WYGR021W 873 nt12.98□□□□□ -0.33
FRT1Q99332 DAL1YIR027C 1383 nt12.94□□□□□ -0.34
FRT1Q99332 INM2YDR287W 879 nt12.94□□□□□ -0.34
FRT1Q99332 BDH2YAL061W 1254 nt12.92□□□□□ -0.34
FRT1Q99332 MNP1YGL068W 585 nt12.89□□□□□ -0.35
FRT1Q99332 FIS1YIL065C 468 nt12.89□□□□□ -0.35
FRT1Q99332 HOM6YJR139C 1080 nt12.89□□□□□ -0.35
FRT1Q99332 YBL100CYBL100C 315 nt12.86□□□□□ -0.35
FRT1Q99332 SPT5YML010W 3192 nt12.85□□□□□ -0.35
FRT1Q99332 PHO4YFR034C 939 nt12.82□□□□□ -0.36
FRT1Q99332 YOR139CYOR139C 393 nt12.82□□□□□ -0.36
FRT1Q99332 NPL3YDR432W 1245 nt12.8□□□□□ -0.36
FRT1Q99332 YFL021C-AYFL021C-A 855 nt12.8□□□□□ -0.36
FRT1Q99332 LSM3YLR438C-A 270 nt12.74□□□□□ -0.37
FRT1Q99332 RKM5YLR137W 1104 nt12.72□□□□□ -0.37
FRT1Q99332 NME1NME1 340 nt12.71□□□□□ -0.37
FRT1Q99332 TRM9YML014W 840 nt12.7□□□□□ -0.38
FRT1Q99332 FUN26YAL022C 1554 nt12.69□□□□□ -0.38
FRT1Q99332 YOL037CYOL037C 354 nt12.67□□□□□ -0.38
FRT1Q99332 SSA4YER103W 1929 nt12.56□□□□□ -0.4
FRT1Q99332 ALF1YNL148C 765 nt12.55□□□□□ -0.4
FRT1Q99332 YPS1YLR120C 1710 nt12.52□□□□□ -0.41
FRT1Q99332 CCT6YDR188W 1641 nt12.51□□□□□ -0.41
FRT1Q99332 SUF2tP(AGG)C 72 nt12.46□□□□□ -0.41
FRT1Q99332 SUF10tP(AGG)N 72 nt12.46□□□□□ -0.41
FRT1Q99332 YHR165W-AYHR165W-A 312 nt12.45□□□□□ -0.42
FRT1Q99332 YDR095CYDR095C 411 nt12.44□□□□□ -0.42
FRT1Q99332 YLR281CYLR281C 468 nt12.35□□□□□ -0.43
FRT1Q99332 WHI5YOR083W 888 nt12.33□□□□□ -0.44
FRT1Q99332 tM(CAU)CtM(CAU)C 72 nt12.32□□□□□ -0.44
FRT1Q99332 IMT4tM(CAU)E 72 nt12.32□□□□□ -0.44
FRT1Q99332 IMT3tM(CAU)J3 72 nt12.32□□□□□ -0.44
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms