Protein–RNA interactions for Protein: P38929

PMC1, Calcium-transporting ATPase 2, yeastyeast

Predicted RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PMC1P38929 YML009W-BYML009W-B 477 nt21.4■■□□□ 1.02
PMC1P38929 NSR1YGR159C 1245 nt21.33■■□□□ 1.01
PMC1P38929 NOP1YDL014W 984 nt20.71■□□□□ 0.91
PMC1P38929 MDJ1YFL016C 1536 nt19.15■□□□□ 0.66
PMC1P38929 YKL036CYKL036C 393 nt18.94■□□□□ 0.62
PMC1P38929 SRX1YKL086W 384 nt18.06■□□□□ 0.48
PMC1P38929 Q0297Q0297 156 nt18.01■□□□□ 0.47
PMC1P38929 YJL027CYJL027C 417 nt17.68■□□□□ 0.42
PMC1P38929 YCR051WYCR051W 669 nt17.2■□□□□ 0.34
PMC1P38929 SCS3YGL126W 1143 nt17.13■□□□□ 0.33
PMC1P38929 DBP2YNL112W 1641 nt16.79■□□□□ 0.28
PMC1P38929 TRN1tP(UGG)A 72 nt16.41■□□□□ 0.22
PMC1P38929 SUF9tP(UGG)F 72 nt16.41■□□□□ 0.22
PMC1P38929 SUF8tP(UGG)H 72 nt16.41■□□□□ 0.22
PMC1P38929 tP(UGG)LtP(UGG)L 72 nt16.41■□□□□ 0.22
PMC1P38929 SUF7tP(UGG)M 72 nt16.41■□□□□ 0.22
PMC1P38929 tP(UGG)N1tP(UGG)N1 72 nt16.41■□□□□ 0.22
PMC1P38929 tP(UGG)N2tP(UGG)N2 72 nt16.41■□□□□ 0.22
PMC1P38929 tP(UGG)O1tP(UGG)O1 72 nt16.41■□□□□ 0.22
PMC1P38929 SUF11tP(UGG)O2 72 nt16.41■□□□□ 0.22
PMC1P38929 YOL085CYOL085C 342 nt16.39■□□□□ 0.21
PMC1P38929 CCC1YLR220W 969 nt16.35■□□□□ 0.21
PMC1P38929 YBR190WYBR190W 312 nt16.34■□□□□ 0.21
PMC1P38929 PKP1YIL042C 1185 nt16.22■□□□□ 0.19
PMC1P38929 RPP1BYDL130W 321 nt16.19■□□□□ 0.18
PMC1P38929 RTC3YHR087W 336 nt16.06■□□□□ 0.16
PMC1P38929 RVS167YDR388W 1449 nt15.85■□□□□ 0.13
PMC1P38929 SCJ1YMR214W 1134 nt15.68■□□□□ 0.1
PMC1P38929 PET122YER153C 765 nt15.5■□□□□ 0.07
PMC1P38929 tP(UGG)O3tP(UGG)O3 72 nt15.49■□□□□ 0.07
PMC1P38929 SCR1SCR1 522 nt15.33■□□□□ 0.04
PMC1P38929 ATS1YAL020C 1002 nt15.27■□□□□ 0.04
PMC1P38929 SHR5YOL110W 714 nt15.21■□□□□ 0.03
PMC1P38929 Q0182Q0182 405 nt15.14■□□□□ 0.01
PMC1P38929 RRN5YLR141W 1092 nt15.03■□□□□ -0
PMC1P38929 YDJ1YNL064C 1230 nt14.97□□□□□ -0.01
PMC1P38929 URN1YPR152C 1398 nt14.92□□□□□ -0.02
PMC1P38929 PUT4YOR348C 1884 nt14.91□□□□□ -0.02
PMC1P38929 DEP1YAL013W 1218 nt14.91□□□□□ -0.02
PMC1P38929 RSB1YOR049C 1065 nt14.73□□□□□ -0.05
PMC1P38929 YER088W-BYER088W-B 147 nt14.72□□□□□ -0.05
PMC1P38929 GAR1YHR089C 618 nt14.72□□□□□ -0.05
PMC1P38929 OPI9YLR338W 858 nt14.71□□□□□ -0.05
PMC1P38929 RPN10YHR200W 807 nt14.69□□□□□ -0.06
PMC1P38929 SAH1YER043C 1350 nt14.68□□□□□ -0.06
PMC1P38929 YNL208WYNL208W 600 nt14.61□□□□□ -0.07
PMC1P38929 ARE1YCR048W 1833 nt14.61□□□□□ -0.07
PMC1P38929 POA1YBR022W 534 nt14.51□□□□□ -0.09
PMC1P38929 YHR049C-AYHR049C-A 297 nt14.49□□□□□ -0.09
PMC1P38929 MOT3YMR070W 1473 nt14.46□□□□□ -0.09
PMC1P38929 PUN1YLR414C 792 nt14.3□□□□□ -0.12
PMC1P38929 SSA3YBL075C 1950 nt14.24□□□□□ -0.13
PMC1P38929 YJR018WYJR018W 363 nt14.22□□□□□ -0.13
PMC1P38929 BSC6YOL137W 1494 nt14.21□□□□□ -0.13
PMC1P38929 TIR1YER011W 765 nt14.21□□□□□ -0.13
PMC1P38929 BUD23YCR047C 828 nt14.2□□□□□ -0.14
PMC1P38929 PTC2YER089C 1395 nt14.16□□□□□ -0.14
PMC1P38929 PST2YDR032C 597 nt14.14□□□□□ -0.15
PMC1P38929 SSA1YAL005C 1929 nt14.05□□□□□ -0.16
PMC1P38929 NAB2YGL122C 1578 nt13.98□□□□□ -0.17
PMC1P38929 RPP2BYDR382W 333 nt13.92□□□□□ -0.18
PMC1P38929 YJR120WYJR120W 351 nt13.89□□□□□ -0.19
PMC1P38929 FPR4YLR449W 1179 nt13.83□□□□□ -0.2
PMC1P38929 DAL1YIR027C 1383 nt13.77□□□□□ -0.21
PMC1P38929 SRB2YHR041C 633 nt13.75□□□□□ -0.21
PMC1P38929 FIS1YIL065C 468 nt13.74□□□□□ -0.21
PMC1P38929 INM2YDR287W 879 nt13.72□□□□□ -0.21
PMC1P38929 PHO4YFR034C 939 nt13.64□□□□□ -0.23
PMC1P38929 SHU1YHL006C 453 nt13.63□□□□□ -0.23
PMC1P38929 YBL100CYBL100C 315 nt13.59□□□□□ -0.23
PMC1P38929 WWM1YFL010C 636 nt13.57□□□□□ -0.24
PMC1P38929 BDH2YAL061W 1254 nt13.57□□□□□ -0.24
PMC1P38929 YKL097CYKL097C 411 nt13.55□□□□□ -0.24
PMC1P38929 YAL037C-BYAL037C-B 975 nt13.53□□□□□ -0.24
PMC1P38929 SPT5YML010W 3192 nt13.47□□□□□ -0.25
PMC1P38929 YGR021WYGR021W 873 nt13.43□□□□□ -0.26
PMC1P38929 FUN26YAL022C 1554 nt13.41□□□□□ -0.26
PMC1P38929 YPS1YLR120C 1710 nt13.4□□□□□ -0.26
PMC1P38929 TRM9YML014W 840 nt13.38□□□□□ -0.27
PMC1P38929 YHR165W-AYHR165W-A 312 nt13.35□□□□□ -0.27
PMC1P38929 LSM3YLR438C-A 270 nt13.35□□□□□ -0.27
PMC1P38929 HOM6YJR139C 1080 nt13.34□□□□□ -0.27
PMC1P38929 YFL021C-AYFL021C-A 855 nt13.33□□□□□ -0.28
PMC1P38929 MEP2YNL142W 1500 nt13.33□□□□□ -0.28
PMC1P38929 MNP1YGL068W 585 nt13.3□□□□□ -0.28
PMC1P38929 ALF1YNL148C 765 nt13.3□□□□□ -0.28
PMC1P38929 YDR095CYDR095C 411 nt13.29□□□□□ -0.28
PMC1P38929 CCT6YDR188W 1641 nt13.19□□□□□ -0.3
PMC1P38929 SSA4YER103W 1929 nt13.17□□□□□ -0.3
PMC1P38929 RKM5YLR137W 1104 nt13.16□□□□□ -0.3
PMC1P38929 SUF2tP(AGG)C 72 nt13.14□□□□□ -0.31
PMC1P38929 SUF10tP(AGG)N 72 nt13.14□□□□□ -0.31
PMC1P38929 DCW1YKL046C 1350 nt13.13□□□□□ -0.31
PMC1P38929 RPP2AYOL039W 321 nt13.07□□□□□ -0.32
PMC1P38929 SIS1YNL007C 1059 nt13.01□□□□□ -0.33
PMC1P38929 NPL3YDR432W 1245 nt12.99□□□□□ -0.33
PMC1P38929 YOR139CYOR139C 393 nt12.99□□□□□ -0.33
PMC1P38929 PTP1YDL230W 1008 nt12.98□□□□□ -0.33
PMC1P38929 YOL037CYOL037C 354 nt12.98□□□□□ -0.33
PMC1P38929 EMI2YDR516C 1503 nt12.98□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms