Protein–RNA interactions for Protein: P22138

RPA135, DNA-directed RNA polymerase I subunit RPA135, yeastyeast

Known RBP Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA135P22138 NSR1YGR159C 1245 nt18.07■□□□□ 0.48
RPA135P22138 YML009W-BYML009W-B 477 nt17.93■□□□□ 0.46
RPA135P22138 NOP1YDL014W 984 nt17.3■□□□□ 0.36
RPA135P22138 MDJ1YFL016C 1536 nt16.45■□□□□ 0.22
RPA135P22138 YKL036CYKL036C 393 nt15.7■□□□□ 0.1
RPA135P22138 SRX1YKL086W 384 nt15.12■□□□□ 0.01
RPA135P22138 YJL027CYJL027C 417 nt15.1■□□□□ 0.01
RPA135P22138 Q0297Q0297 156 nt15.05■□□□□ -0
RPA135P22138 Q0182Q0182 405 nt14.73□□□□□ -0.05
RPA135P22138 DBP2YNL112W 1641 nt14.38□□□□□ -0.11
RPA135P22138 YCR051WYCR051W 669 nt14.34□□□□□ -0.11
RPA135P22138 SSA3YBL075C 1950 nt14.3□□□□□ -0.12
RPA135P22138 SCS3YGL126W 1143 nt14.13□□□□□ -0.15
RPA135P22138 YBR190WYBR190W 312 nt14.08□□□□□ -0.16
RPA135P22138 MOT3YMR070W 1473 nt13.98□□□□□ -0.17
RPA135P22138 TRN1tP(UGG)A 72 nt13.85□□□□□ -0.19
RPA135P22138 SUF9tP(UGG)F 72 nt13.85□□□□□ -0.19
RPA135P22138 SUF8tP(UGG)H 72 nt13.85□□□□□ -0.19
RPA135P22138 tP(UGG)LtP(UGG)L 72 nt13.85□□□□□ -0.19
RPA135P22138 SUF7tP(UGG)M 72 nt13.85□□□□□ -0.19
RPA135P22138 tP(UGG)N1tP(UGG)N1 72 nt13.85□□□□□ -0.19
RPA135P22138 tP(UGG)N2tP(UGG)N2 72 nt13.85□□□□□ -0.19
RPA135P22138 tP(UGG)O1tP(UGG)O1 72 nt13.85□□□□□ -0.19
RPA135P22138 SUF11tP(UGG)O2 72 nt13.85□□□□□ -0.19
RPA135P22138 RTC3YHR087W 336 nt13.76□□□□□ -0.21
RPA135P22138 CCC1YLR220W 969 nt13.72□□□□□ -0.21
RPA135P22138 SSA1YAL005C 1929 nt13.7□□□□□ -0.22
RPA135P22138 YOL085CYOL085C 342 nt13.62□□□□□ -0.23
RPA135P22138 RPP1BYDL130W 321 nt13.51□□□□□ -0.25
RPA135P22138 PKP1YIL042C 1185 nt13.46□□□□□ -0.25
RPA135P22138 RVS167YDR388W 1449 nt13.39□□□□□ -0.27
RPA135P22138 SCJ1YMR214W 1134 nt13.29□□□□□ -0.28
RPA135P22138 PUT4YOR348C 1884 nt13.12□□□□□ -0.31
RPA135P22138 tP(UGG)O3tP(UGG)O3 72 nt13.02□□□□□ -0.33
RPA135P22138 FPS1YLL043W 2010 nt13.01□□□□□ -0.33
RPA135P22138 PET122YER153C 765 nt12.95□□□□□ -0.34
RPA135P22138 SHR5YOL110W 714 nt12.86□□□□□ -0.35
RPA135P22138 ARE1YCR048W 1833 nt12.77□□□□□ -0.37
RPA135P22138 URN1YPR152C 1398 nt12.74□□□□□ -0.37
RPA135P22138 SCR1SCR1 522 nt12.72□□□□□ -0.37
RPA135P22138 POA1YBR022W 534 nt12.69□□□□□ -0.38
RPA135P22138 SAH1YER043C 1350 nt12.68□□□□□ -0.38
RPA135P22138 DEP1YAL013W 1218 nt12.65□□□□□ -0.38
RPA135P22138 OPI9YLR338W 858 nt12.63□□□□□ -0.39
RPA135P22138 YHR049C-AYHR049C-A 297 nt12.61□□□□□ -0.39
RPA135P22138 YDJ1YNL064C 1230 nt12.58□□□□□ -0.4
RPA135P22138 ATS1YAL020C 1002 nt12.56□□□□□ -0.4
RPA135P22138 RRN5YLR141W 1092 nt12.56□□□□□ -0.4
RPA135P22138 BSC6YOL137W 1494 nt12.49□□□□□ -0.41
RPA135P22138 RPN10YHR200W 807 nt12.42□□□□□ -0.42
RPA135P22138 NVJ2YPR091C 2313 nt12.4□□□□□ -0.42
RPA135P22138 YNL208WYNL208W 600 nt12.37□□□□□ -0.43
RPA135P22138 GAR1YHR089C 618 nt12.36□□□□□ -0.43
RPA135P22138 PAC11YDR488C 1602 nt12.31□□□□□ -0.44
RPA135P22138 YER088W-BYER088W-B 147 nt12.3□□□□□ -0.44
RPA135P22138 BUD23YCR047C 828 nt12.29□□□□□ -0.44
RPA135P22138 PUN1YLR414C 792 nt12.24□□□□□ -0.45
RPA135P22138 RSB1YOR049C 1065 nt12.21□□□□□ -0.45
RPA135P22138 SPT5YML010W 3192 nt12.21□□□□□ -0.46
RPA135P22138 PTC2YER089C 1395 nt12.19□□□□□ -0.46
RPA135P22138 YJR018WYJR018W 363 nt12.12□□□□□ -0.47
RPA135P22138 RPM1RPM1 483 nt12.08□□□□□ -0.48
RPA135P22138 NAB2YGL122C 1578 nt12.07□□□□□ -0.48
RPA135P22138 SSA4YER103W 1929 nt11.96□□□□□ -0.49
RPA135P22138 TIR1YER011W 765 nt11.95□□□□□ -0.5
RPA135P22138 FRE6YLL051C 2139 nt11.9□□□□□ -0.5
RPA135P22138 FIS1YIL065C 468 nt11.89□□□□□ -0.51
RPA135P22138 YJR120WYJR120W 351 nt11.89□□□□□ -0.51
RPA135P22138 DAL1YIR027C 1383 nt11.84□□□□□ -0.51
RPA135P22138 FPR4YLR449W 1179 nt11.82□□□□□ -0.52
RPA135P22138 RPP2BYDR382W 333 nt11.76□□□□□ -0.53
RPA135P22138 MEP2YNL142W 1500 nt11.76□□□□□ -0.53
RPA135P22138 PHO4YFR034C 939 nt11.74□□□□□ -0.53
RPA135P22138 INM2YDR287W 879 nt11.72□□□□□ -0.53
RPA135P22138 PST2YDR032C 597 nt11.68□□□□□ -0.54
RPA135P22138 YPS1YLR120C 1710 nt11.66□□□□□ -0.54
RPA135P22138 SRB2YHR041C 633 nt11.63□□□□□ -0.55
RPA135P22138 DCW1YKL046C 1350 nt11.6□□□□□ -0.55
RPA135P22138 YBL100CYBL100C 315 nt11.56□□□□□ -0.56
RPA135P22138 BDF1YLR399C 2061 nt11.55□□□□□ -0.56
RPA135P22138 YHR165W-AYHR165W-A 312 nt11.55□□□□□ -0.56
RPA135P22138 YDR095CYDR095C 411 nt11.52□□□□□ -0.57
RPA135P22138 BDH2YAL061W 1254 nt11.48□□□□□ -0.57
RPA135P22138 UME6YDR207C 2511 nt11.42□□□□□ -0.58
RPA135P22138 FUN26YAL022C 1554 nt11.41□□□□□ -0.58
RPA135P22138 EMI2YDR516C 1503 nt11.41□□□□□ -0.58
RPA135P22138 WWM1YFL010C 636 nt11.39□□□□□ -0.59
RPA135P22138 TAT1YBR069C 1860 nt11.38□□□□□ -0.59
RPA135P22138 YBR220CYBR220C 1683 nt11.33□□□□□ -0.6
RPA135P22138 TRM9YML014W 840 nt11.32□□□□□ -0.6
RPA135P22138 YMR090WYMR090W 684 nt11.32□□□□□ -0.6
RPA135P22138 ALF1YNL148C 765 nt11.32□□□□□ -0.6
RPA135P22138 CAC2YML102W 1407 nt11.32□□□□□ -0.6
RPA135P22138 PTP1YDL230W 1008 nt11.31□□□□□ -0.6
RPA135P22138 RPP2AYOL039W 321 nt11.3□□□□□ -0.6
RPA135P22138 SSN3YPL042C 1668 nt11.28□□□□□ -0.6
RPA135P22138 YDL221WYDL221W 552 nt11.28□□□□□ -0.6
RPA135P22138 SHU1YHL006C 453 nt11.28□□□□□ -0.6
RPA135P22138 LSM3YLR438C-A 270 nt11.26□□□□□ -0.61
RPA135P22138 SDH1YKL148C 1923 nt11.23□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms