Protein–RNA interactions for Protein: P53256

RRP46, Exosome complex component RRP46, yeastyeast

Predicted RBP Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP46P53256 YML009W-BYML009W-B 477 nt26.43■■□□□ 1.82
RRP46P53256 NSR1YGR159C 1245 nt26.07■■□□□ 1.76
RRP46P53256 NOP1YDL014W 984 nt25.52■■□□□ 1.68
RRP46P53256 YKL036CYKL036C 393 nt23.71■■□□□ 1.39
RRP46P53256 MDJ1YFL016C 1536 nt23.33■■□□□ 1.33
RRP46P53256 Q0297Q0297 156 nt22.44■■□□□ 1.18
RRP46P53256 SRX1YKL086W 384 nt22.39■■□□□ 1.17
RRP46P53256 YJL027CYJL027C 417 nt22.19■■□□□ 1.14
RRP46P53256 SCS3YGL126W 1143 nt21.71■■□□□ 1.07
RRP46P53256 YCR051WYCR051W 669 nt21.32■■□□□ 1
RRP46P53256 DBP2YNL112W 1641 nt20.67■□□□□ 0.9
RRP46P53256 YOL085CYOL085C 342 nt20.61■□□□□ 0.89
RRP46P53256 PKP1YIL042C 1185 nt20.43■□□□□ 0.86
RRP46P53256 TRN1tP(UGG)A 72 nt20.26■□□□□ 0.83
RRP46P53256 SUF9tP(UGG)F 72 nt20.26■□□□□ 0.83
RRP46P53256 SUF8tP(UGG)H 72 nt20.26■□□□□ 0.83
RRP46P53256 tP(UGG)LtP(UGG)L 72 nt20.26■□□□□ 0.83
RRP46P53256 SUF7tP(UGG)M 72 nt20.26■□□□□ 0.83
RRP46P53256 tP(UGG)N1tP(UGG)N1 72 nt20.26■□□□□ 0.83
RRP46P53256 tP(UGG)N2tP(UGG)N2 72 nt20.26■□□□□ 0.83
RRP46P53256 tP(UGG)O1tP(UGG)O1 72 nt20.26■□□□□ 0.83
RRP46P53256 SUF11tP(UGG)O2 72 nt20.26■□□□□ 0.83
RRP46P53256 CCC1YLR220W 969 nt20.17■□□□□ 0.82
RRP46P53256 RPP1BYDL130W 321 nt20.16■□□□□ 0.82
RRP46P53256 YBR190WYBR190W 312 nt19.67■□□□□ 0.74
RRP46P53256 ATS1YAL020C 1002 nt19.39■□□□□ 0.69
RRP46P53256 SCJ1YMR214W 1134 nt19.39■□□□□ 0.69
RRP46P53256 PET122YER153C 765 nt19.37■□□□□ 0.69
RRP46P53256 RTC3YHR087W 336 nt19.33■□□□□ 0.68
RRP46P53256 tP(UGG)O3tP(UGG)O3 72 nt19.2■□□□□ 0.66
RRP46P53256 RVS167YDR388W 1449 nt19.19■□□□□ 0.66
RRP46P53256 SCR1SCR1 522 nt18.98■□□□□ 0.63
RRP46P53256 RRN5YLR141W 1092 nt18.8■□□□□ 0.6
RRP46P53256 SHR5YOL110W 714 nt18.61■□□□□ 0.57
RRP46P53256 YDJ1YNL064C 1230 nt18.47■□□□□ 0.55
RRP46P53256 YER088W-BYER088W-B 147 nt18.42■□□□□ 0.54
RRP46P53256 RSB1YOR049C 1065 nt18.4■□□□□ 0.54
RRP46P53256 DEP1YAL013W 1218 nt18.27■□□□□ 0.52
RRP46P53256 GAR1YHR089C 618 nt18.2■□□□□ 0.5
RRP46P53256 URN1YPR152C 1398 nt18.14■□□□□ 0.49
RRP46P53256 PST2YDR032C 597 nt17.97■□□□□ 0.47
RRP46P53256 PUT4YOR348C 1884 nt17.95■□□□□ 0.46
RRP46P53256 SAH1YER043C 1350 nt17.79■□□□□ 0.44
RRP46P53256 OPI9YLR338W 858 nt17.79■□□□□ 0.44
RRP46P53256 YNL208WYNL208W 600 nt17.78■□□□□ 0.44
RRP46P53256 RPN10YHR200W 807 nt17.68■□□□□ 0.42
RRP46P53256 ARE1YCR048W 1833 nt17.68■□□□□ 0.42
RRP46P53256 TIR1YER011W 765 nt17.54■□□□□ 0.4
RRP46P53256 POA1YBR022W 534 nt17.43■□□□□ 0.38
RRP46P53256 YHR049C-AYHR049C-A 297 nt17.42■□□□□ 0.38
RRP46P53256 SSA1YAL005C 1929 nt17.41■□□□□ 0.38
RRP46P53256 SRB2YHR041C 633 nt17.32■□□□□ 0.36
RRP46P53256 SHU1YHL006C 453 nt17.3■□□□□ 0.36
RRP46P53256 YJR018WYJR018W 363 nt17.26■□□□□ 0.35
RRP46P53256 YKL097CYKL097C 411 nt17.24■□□□□ 0.35
RRP46P53256 PUN1YLR414C 792 nt17.21■□□□□ 0.35
RRP46P53256 YJR120WYJR120W 351 nt17.19■□□□□ 0.34
RRP46P53256 PTC2YER089C 1395 nt17.13■□□□□ 0.33
RRP46P53256 YAL037C-BYAL037C-B 975 nt17.11■□□□□ 0.33
RRP46P53256 BUD23YCR047C 828 nt17.04■□□□□ 0.32
RRP46P53256 BSC6YOL137W 1494 nt17.01■□□□□ 0.31
RRP46P53256 WWM1YFL010C 636 nt16.87■□□□□ 0.29
RRP46P53256 RPP2BYDR382W 333 nt16.81■□□□□ 0.28
RRP46P53256 NAB2YGL122C 1578 nt16.8■□□□□ 0.28
RRP46P53256 MNP1YGL068W 585 nt16.71■□□□□ 0.27
RRP46P53256 SSA3YBL075C 1950 nt16.69■□□□□ 0.26
RRP46P53256 FIS1YIL065C 468 nt16.69■□□□□ 0.26
RRP46P53256 FPR4YLR449W 1179 nt16.68■□□□□ 0.26
RRP46P53256 YOR139CYOR139C 393 nt16.67■□□□□ 0.26
RRP46P53256 HOM6YJR139C 1080 nt16.66■□□□□ 0.26
RRP46P53256 DAL1YIR027C 1383 nt16.61■□□□□ 0.25
RRP46P53256 BDH2YAL061W 1254 nt16.57■□□□□ 0.24
RRP46P53256 YGR021WYGR021W 873 nt16.56■□□□□ 0.24
RRP46P53256 INM2YDR287W 879 nt16.54■□□□□ 0.24
RRP46P53256 PHO4YFR034C 939 nt16.51■□□□□ 0.23
RRP46P53256 YBL100CYBL100C 315 nt16.49■□□□□ 0.23
RRP46P53256 YFL021C-AYFL021C-A 855 nt16.42■□□□□ 0.22
RRP46P53256 RKM5YLR137W 1104 nt16.4■□□□□ 0.22
RRP46P53256 NPL3YDR432W 1245 nt16.37■□□□□ 0.21
RRP46P53256 FUN26YAL022C 1554 nt16.33■□□□□ 0.2
RRP46P53256 LSM3YLR438C-A 270 nt16.29■□□□□ 0.2
RRP46P53256 TRM9YML014W 840 nt16.23■□□□□ 0.19
RRP46P53256 YOL037CYOL037C 354 nt16.21■□□□□ 0.19
RRP46P53256 SPT5YML010W 3192 nt16.2■□□□□ 0.18
RRP46P53256 YPS1YLR120C 1710 nt16.16■□□□□ 0.18
RRP46P53256 CCT6YDR188W 1641 nt16.08■□□□□ 0.16
RRP46P53256 YDR095CYDR095C 411 nt16.05■□□□□ 0.16
RRP46P53256 ALF1YNL148C 765 nt16■□□□□ 0.15
RRP46P53256 tM(CAU)CtM(CAU)C 72 nt15.98■□□□□ 0.15
RRP46P53256 IMT4tM(CAU)E 72 nt15.98■□□□□ 0.15
RRP46P53256 IMT3tM(CAU)J3 72 nt15.98■□□□□ 0.15
RRP46P53256 IMT1tM(CAU)O1 72 nt15.98■□□□□ 0.15
RRP46P53256 IMT2tM(CAU)P 72 nt15.98■□□□□ 0.15
RRP46P53256 YHR165W-AYHR165W-A 312 nt15.96■□□□□ 0.15
RRP46P53256 YLR281CYLR281C 468 nt15.94■□□□□ 0.14
RRP46P53256 MEP2YNL142W 1500 nt15.91■□□□□ 0.14
RRP46P53256 WHI5YOR083W 888 nt15.91■□□□□ 0.14
RRP46P53256 PUS2YGL063W 1113 nt15.84■□□□□ 0.13
RRP46P53256 SUF2tP(AGG)C 72 nt15.82■□□□□ 0.12
RRP46P53256 SUF10tP(AGG)N 72 nt15.82■□□□□ 0.12
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms