Protein–RNA interactions for Protein: P40357

SEC9, Protein transport protein SEC9, yeastyeast

Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC9P40357 NSR1YGR159C 1245 nt21.73■■□□□ 1.07
SEC9P40357 YML009W-BYML009W-B 477 nt21.53■■□□□ 1.04
SEC9P40357 NOP1YDL014W 984 nt20.66■□□□□ 0.9
SEC9P40357 MDJ1YFL016C 1536 nt19.79■□□□□ 0.76
SEC9P40357 YKL036CYKL036C 393 nt18.73■□□□□ 0.59
SEC9P40357 YJL027CYJL027C 417 nt18.13■□□□□ 0.49
SEC9P40357 SRX1YKL086W 384 nt18.13■□□□□ 0.49
SEC9P40357 Q0297Q0297 156 nt18.03■□□□□ 0.48
SEC9P40357 DBP2YNL112W 1641 nt17.39■□□□□ 0.38
SEC9P40357 YCR051WYCR051W 669 nt17.14■□□□□ 0.33
SEC9P40357 YBR190WYBR190W 312 nt16.91■□□□□ 0.3
SEC9P40357 SCS3YGL126W 1143 nt16.89■□□□□ 0.29
SEC9P40357 TRN1tP(UGG)A 72 nt16.69■□□□□ 0.26
SEC9P40357 SUF9tP(UGG)F 72 nt16.69■□□□□ 0.26
SEC9P40357 SUF8tP(UGG)H 72 nt16.69■□□□□ 0.26
SEC9P40357 tP(UGG)LtP(UGG)L 72 nt16.69■□□□□ 0.26
SEC9P40357 SUF7tP(UGG)M 72 nt16.69■□□□□ 0.26
SEC9P40357 tP(UGG)N1tP(UGG)N1 72 nt16.69■□□□□ 0.26
SEC9P40357 tP(UGG)N2tP(UGG)N2 72 nt16.69■□□□□ 0.26
SEC9P40357 tP(UGG)O1tP(UGG)O1 72 nt16.69■□□□□ 0.26
SEC9P40357 SUF11tP(UGG)O2 72 nt16.69■□□□□ 0.26
SEC9P40357 RTC3YHR087W 336 nt16.48■□□□□ 0.23
SEC9P40357 CCC1YLR220W 969 nt16.48■□□□□ 0.23
SEC9P40357 YOL085CYOL085C 342 nt16.28■□□□□ 0.2
SEC9P40357 RPP1BYDL130W 321 nt16.17■□□□□ 0.18
SEC9P40357 PKP1YIL042C 1185 nt16.11■□□□□ 0.17
SEC9P40357 SCJ1YMR214W 1134 nt16.08■□□□□ 0.16
SEC9P40357 RVS167YDR388W 1449 nt16.06■□□□□ 0.16
SEC9P40357 SSA3YBL075C 1950 nt15.78■□□□□ 0.12
SEC9P40357 PUT4YOR348C 1884 nt15.78■□□□□ 0.12
SEC9P40357 tP(UGG)O3tP(UGG)O3 72 nt15.63■□□□□ 0.09
SEC9P40357 PET122YER153C 765 nt15.56■□□□□ 0.08
SEC9P40357 SHR5YOL110W 714 nt15.47■□□□□ 0.07
SEC9P40357 ARE1YCR048W 1833 nt15.36■□□□□ 0.05
SEC9P40357 URN1YPR152C 1398 nt15.33■□□□□ 0.04
SEC9P40357 SAH1YER043C 1350 nt15.24■□□□□ 0.03
SEC9P40357 DEP1YAL013W 1218 nt15.23■□□□□ 0.03
SEC9P40357 POA1YBR022W 534 nt15.21■□□□□ 0.03
SEC9P40357 OPI9YLR338W 858 nt15.18■□□□□ 0.02
SEC9P40357 SCR1SCR1 522 nt15.14■□□□□ 0.01
SEC9P40357 YHR049C-AYHR049C-A 297 nt15.13■□□□□ 0.01
SEC9P40357 YDJ1YNL064C 1230 nt15.09■□□□□ 0.01
SEC9P40357 RRN5YLR141W 1092 nt15.04■□□□□ -0
SEC9P40357 BSC6YOL137W 1494 nt14.98□□□□□ -0.01
SEC9P40357 ATS1YAL020C 1002 nt14.96□□□□□ -0.01
SEC9P40357 RPN10YHR200W 807 nt14.89□□□□□ -0.03
SEC9P40357 YNL208WYNL208W 600 nt14.87□□□□□ -0.03
SEC9P40357 GAR1YHR089C 618 nt14.84□□□□□ -0.03
SEC9P40357 YER088W-BYER088W-B 147 nt14.75□□□□□ -0.05
SEC9P40357 SPT5YML010W 3192 nt14.71□□□□□ -0.05
SEC9P40357 BUD23YCR047C 828 nt14.7□□□□□ -0.06
SEC9P40357 PUN1YLR414C 792 nt14.7□□□□□ -0.06
SEC9P40357 PTC2YER089C 1395 nt14.64□□□□□ -0.07
SEC9P40357 YJR018WYJR018W 363 nt14.58□□□□□ -0.08
SEC9P40357 RSB1YOR049C 1065 nt14.56□□□□□ -0.08
SEC9P40357 NAB2YGL122C 1578 nt14.47□□□□□ -0.09
SEC9P40357 YJR120WYJR120W 351 nt14.41□□□□□ -0.1
SEC9P40357 TIR1YER011W 765 nt14.36□□□□□ -0.11
SEC9P40357 SSA1YAL005C 1929 nt14.34□□□□□ -0.11
SEC9P40357 FIS1YIL065C 468 nt14.33□□□□□ -0.12
SEC9P40357 SSA4YER103W 1929 nt14.3□□□□□ -0.12
SEC9P40357 DAL1YIR027C 1383 nt14.22□□□□□ -0.13
SEC9P40357 FPR4YLR449W 1179 nt14.15□□□□□ -0.14
SEC9P40357 SRB2YHR041C 633 nt14.13□□□□□ -0.15
SEC9P40357 PHO4YFR034C 939 nt14.12□□□□□ -0.15
SEC9P40357 RPP2BYDR382W 333 nt14.09□□□□□ -0.15
SEC9P40357 MEP2YNL142W 1500 nt14.09□□□□□ -0.15
SEC9P40357 INM2YDR287W 879 nt14.06□□□□□ -0.16
SEC9P40357 YPS1YLR120C 1710 nt14.01□□□□□ -0.17
SEC9P40357 PST2YDR032C 597 nt13.95□□□□□ -0.18
SEC9P40357 DCW1YKL046C 1350 nt13.92□□□□□ -0.18
SEC9P40357 YBL100CYBL100C 315 nt13.91□□□□□ -0.18
SEC9P40357 YDR095CYDR095C 411 nt13.85□□□□□ -0.19
SEC9P40357 BDF1YLR399C 2061 nt13.84□□□□□ -0.19
SEC9P40357 YHR165W-AYHR165W-A 312 nt13.82□□□□□ -0.2
SEC9P40357 BDH2YAL061W 1254 nt13.81□□□□□ -0.2
SEC9P40357 FUN26YAL022C 1554 nt13.75□□□□□ -0.21
SEC9P40357 WWM1YFL010C 636 nt13.7□□□□□ -0.22
SEC9P40357 EMI2YDR516C 1503 nt13.67□□□□□ -0.22
SEC9P40357 PTP1YDL230W 1008 nt13.64□□□□□ -0.23
SEC9P40357 TAT1YBR069C 1860 nt13.63□□□□□ -0.23
SEC9P40357 CAC2YML102W 1407 nt13.61□□□□□ -0.23
SEC9P40357 FPS1YLL043W 2010 nt13.61□□□□□ -0.23
SEC9P40357 YBR220CYBR220C 1683 nt13.59□□□□□ -0.23
SEC9P40357 TRM9YML014W 840 nt13.58□□□□□ -0.24
SEC9P40357 ALF1YNL148C 765 nt13.56□□□□□ -0.24
SEC9P40357 RPP2AYOL039W 321 nt13.55□□□□□ -0.24
SEC9P40357 YDL221WYDL221W 552 nt13.53□□□□□ -0.24
SEC9P40357 LSM3YLR438C-A 270 nt13.52□□□□□ -0.25
SEC9P40357 CCT6YDR188W 1641 nt13.52□□□□□ -0.25
SEC9P40357 SHU1YHL006C 453 nt13.51□□□□□ -0.25
SEC9P40357 NVJ2YPR091C 2313 nt13.51□□□□□ -0.25
SEC9P40357 YMR090WYMR090W 684 nt13.48□□□□□ -0.25
SEC9P40357 SDH1YKL148C 1923 nt13.46□□□□□ -0.25
SEC9P40357 SIS1YNL007C 1059 nt13.45□□□□□ -0.26
SEC9P40357 YAL037C-BYAL037C-B 975 nt13.44□□□□□ -0.26
SEC9P40357 YFL021C-AYFL021C-A 855 nt13.42□□□□□ -0.26
SEC9P40357 HOM6YJR139C 1080 nt13.41□□□□□ -0.26
SEC9P40357 IRC15YPL017C 1500 nt13.4□□□□□ -0.26
SEC9P40357 YGR021WYGR021W 873 nt13.39□□□□□ -0.27
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms