Protein–RNA interactions for Protein: P38779

CIC1, Proteasome-interacting protein CIC1, yeastyeast

Known RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIC1P38779 YML009W-BYML009W-B 477 nt23.84■■□□□ 1.41
CIC1P38779 NSR1YGR159C 1245 nt23.72■■□□□ 1.39
CIC1P38779 NOP1YDL014W 984 nt23.09■■□□□ 1.29
CIC1P38779 YKL036CYKL036C 393 nt21.3■■□□□ 1
CIC1P38779 MDJ1YFL016C 1536 nt21.19■□□□□ 0.98
CIC1P38779 Q0297Q0297 156 nt20.26■□□□□ 0.83
CIC1P38779 SRX1YKL086W 384 nt20.23■□□□□ 0.83
CIC1P38779 YJL027CYJL027C 417 nt19.87■□□□□ 0.77
CIC1P38779 SCS3YGL126W 1143 nt19.41■□□□□ 0.7
CIC1P38779 YCR051WYCR051W 669 nt19.17■□□□□ 0.66
CIC1P38779 DBP2YNL112W 1641 nt18.76■□□□□ 0.59
CIC1P38779 YOL085CYOL085C 342 nt18.49■□□□□ 0.55
CIC1P38779 TRN1tP(UGG)A 72 nt18.36■□□□□ 0.53
CIC1P38779 SUF9tP(UGG)F 72 nt18.36■□□□□ 0.53
CIC1P38779 SUF8tP(UGG)H 72 nt18.36■□□□□ 0.53
CIC1P38779 tP(UGG)LtP(UGG)L 72 nt18.36■□□□□ 0.53
CIC1P38779 SUF7tP(UGG)M 72 nt18.36■□□□□ 0.53
CIC1P38779 tP(UGG)N1tP(UGG)N1 72 nt18.36■□□□□ 0.53
CIC1P38779 tP(UGG)N2tP(UGG)N2 72 nt18.36■□□□□ 0.53
CIC1P38779 tP(UGG)O1tP(UGG)O1 72 nt18.36■□□□□ 0.53
CIC1P38779 SUF11tP(UGG)O2 72 nt18.36■□□□□ 0.53
CIC1P38779 PKP1YIL042C 1185 nt18.23■□□□□ 0.51
CIC1P38779 RPP1BYDL130W 321 nt18.17■□□□□ 0.5
CIC1P38779 CCC1YLR220W 969 nt18.14■□□□□ 0.49
CIC1P38779 YBR190WYBR190W 312 nt18.02■□□□□ 0.48
CIC1P38779 RTC3YHR087W 336 nt17.59■□□□□ 0.41
CIC1P38779 SCJ1YMR214W 1134 nt17.54■□□□□ 0.4
CIC1P38779 RVS167YDR388W 1449 nt17.48■□□□□ 0.39
CIC1P38779 PET122YER153C 765 nt17.41■□□□□ 0.38
CIC1P38779 tP(UGG)O3tP(UGG)O3 72 nt17.34■□□□□ 0.37
CIC1P38779 ATS1YAL020C 1002 nt17.32■□□□□ 0.36
CIC1P38779 SCR1SCR1 522 nt17.11■□□□□ 0.33
CIC1P38779 SHR5YOL110W 714 nt16.92■□□□□ 0.3
CIC1P38779 RRN5YLR141W 1092 nt16.88■□□□□ 0.29
CIC1P38779 YDJ1YNL064C 1230 nt16.76■□□□□ 0.27
CIC1P38779 YER088W-BYER088W-B 147 nt16.56■□□□□ 0.24
CIC1P38779 URN1YPR152C 1398 nt16.49■□□□□ 0.23
CIC1P38779 DEP1YAL013W 1218 nt16.48■□□□□ 0.23
CIC1P38779 RSB1YOR049C 1065 nt16.48■□□□□ 0.23
CIC1P38779 PUT4YOR348C 1884 nt16.46■□□□□ 0.23
CIC1P38779 GAR1YHR089C 618 nt16.4■□□□□ 0.22
CIC1P38779 OPI9YLR338W 858 nt16.26■□□□□ 0.19
CIC1P38779 SAH1YER043C 1350 nt16.2■□□□□ 0.18
CIC1P38779 YNL208WYNL208W 600 nt16.18■□□□□ 0.18
CIC1P38779 RPN10YHR200W 807 nt16.16■□□□□ 0.18
CIC1P38779 ARE1YCR048W 1833 nt16.16■□□□□ 0.18
CIC1P38779 PST2YDR032C 597 nt16.07■□□□□ 0.16
CIC1P38779 YHR049C-AYHR049C-A 297 nt15.92■□□□□ 0.14
CIC1P38779 POA1YBR022W 534 nt15.92■□□□□ 0.14
CIC1P38779 TIR1YER011W 765 nt15.85■□□□□ 0.13
CIC1P38779 PUN1YLR414C 792 nt15.76■□□□□ 0.11
CIC1P38779 SSA1YAL005C 1929 nt15.72■□□□□ 0.11
CIC1P38779 YJR018WYJR018W 363 nt15.71■□□□□ 0.11
CIC1P38779 PTC2YER089C 1395 nt15.61■□□□□ 0.09
CIC1P38779 BSC6YOL137W 1494 nt15.59■□□□□ 0.09
CIC1P38779 YJR120WYJR120W 351 nt15.58■□□□□ 0.08
CIC1P38779 SRB2YHR041C 633 nt15.54■□□□□ 0.08
CIC1P38779 BUD23YCR047C 828 nt15.52■□□□□ 0.08
CIC1P38779 SHU1YHL006C 453 nt15.45■□□□□ 0.06
CIC1P38779 SSA3YBL075C 1950 nt15.44■□□□□ 0.06
CIC1P38779 NAB2YGL122C 1578 nt15.38■□□□□ 0.05
CIC1P38779 YKL097CYKL097C 411 nt15.36■□□□□ 0.05
CIC1P38779 RPP2BYDR382W 333 nt15.32■□□□□ 0.04
CIC1P38779 FIS1YIL065C 468 nt15.25■□□□□ 0.03
CIC1P38779 YAL037C-BYAL037C-B 975 nt15.23■□□□□ 0.03
CIC1P38779 DAL1YIR027C 1383 nt15.19■□□□□ 0.02
CIC1P38779 WWM1YFL010C 636 nt15.17■□□□□ 0.02
CIC1P38779 FPR4YLR449W 1179 nt15.13■□□□□ 0.01
CIC1P38779 INM2YDR287W 879 nt15.12■□□□□ 0.01
CIC1P38779 BDH2YAL061W 1254 nt15.07■□□□□ 0
CIC1P38779 PHO4YFR034C 939 nt15.06■□□□□ 0
CIC1P38779 HOM6YJR139C 1080 nt15.01□□□□□ -0.01
CIC1P38779 YBL100CYBL100C 315 nt15.01□□□□□ -0.01
CIC1P38779 YGR021WYGR021W 873 nt15□□□□□ -0.01
CIC1P38779 SPT5YML010W 3192 nt14.96□□□□□ -0.01
CIC1P38779 MNP1YGL068W 585 nt14.96□□□□□ -0.01
CIC1P38779 YFL021C-AYFL021C-A 855 nt14.89□□□□□ -0.03
CIC1P38779 LSM3YLR438C-A 270 nt14.85□□□□□ -0.03
CIC1P38779 YOR139CYOR139C 393 nt14.84□□□□□ -0.03
CIC1P38779 FUN26YAL022C 1554 nt14.84□□□□□ -0.03
CIC1P38779 Q0182Q0182 405 nt14.81□□□□□ -0.04
CIC1P38779 YPS1YLR120C 1710 nt14.8□□□□□ -0.04
CIC1P38779 RKM5YLR137W 1104 nt14.78□□□□□ -0.04
CIC1P38779 TRM9YML014W 840 nt14.75□□□□□ -0.05
CIC1P38779 YDR095CYDR095C 411 nt14.7□□□□□ -0.06
CIC1P38779 CCT6YDR188W 1641 nt14.66□□□□□ -0.06
CIC1P38779 MEP2YNL142W 1500 nt14.63□□□□□ -0.07
CIC1P38779 NPL3YDR432W 1245 nt14.62□□□□□ -0.07
CIC1P38779 YOL037CYOL037C 354 nt14.62□□□□□ -0.07
CIC1P38779 YHR165W-AYHR165W-A 312 nt14.59□□□□□ -0.07
CIC1P38779 ALF1YNL148C 765 nt14.58□□□□□ -0.08
CIC1P38779 SUF2tP(AGG)C 72 nt14.47□□□□□ -0.09
CIC1P38779 SUF10tP(AGG)N 72 nt14.47□□□□□ -0.09
CIC1P38779 DCW1YKL046C 1350 nt14.46□□□□□ -0.1
CIC1P38779 SIS1YNL007C 1059 nt14.43□□□□□ -0.1
CIC1P38779 PTP1YDL230W 1008 nt14.42□□□□□ -0.1
CIC1P38779 MOT3YMR070W 1473 nt14.41□□□□□ -0.1
CIC1P38779 RPP2AYOL039W 321 nt14.4□□□□□ -0.1
CIC1P38779 SSA4YER103W 1929 nt14.37□□□□□ -0.11
CIC1P38779 YLR281CYLR281C 468 nt14.32□□□□□ -0.12
Retrieved 100 of 7,029 protein–RNA pairs in 9.9 ms