Protein–RNA interactions for Protein: Q05506

YDR341C, Arginine--tRNA ligase, cytoplasmic, yeastyeast

Known RBP Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YDR341CQ05506 YML009W-BYML009W-B 477 nt23.38■■□□□ 1.33
YDR341CQ05506 NSR1YGR159C 1245 nt23.19■■□□□ 1.3
YDR341CQ05506 NOP1YDL014W 984 nt22.75■■□□□ 1.23
YDR341CQ05506 YKL036CYKL036C 393 nt21.04■□□□□ 0.96
YDR341CQ05506 MDJ1YFL016C 1536 nt20.55■□□□□ 0.88
YDR341CQ05506 Q0297Q0297 156 nt19.94■□□□□ 0.78
YDR341CQ05506 SRX1YKL086W 384 nt19.88■□□□□ 0.77
YDR341CQ05506 YJL027CYJL027C 417 nt19.66■□□□□ 0.74
YDR341CQ05506 SCS3YGL126W 1143 nt19.18■□□□□ 0.66
YDR341CQ05506 YCR051WYCR051W 669 nt18.87■□□□□ 0.61
YDR341CQ05506 YOL085CYOL085C 342 nt18.24■□□□□ 0.51
YDR341CQ05506 DBP2YNL112W 1641 nt18.21■□□□□ 0.51
YDR341CQ05506 PKP1YIL042C 1185 nt17.96■□□□□ 0.47
YDR341CQ05506 TRN1tP(UGG)A 72 nt17.95■□□□□ 0.46
YDR341CQ05506 SUF9tP(UGG)F 72 nt17.95■□□□□ 0.46
YDR341CQ05506 SUF8tP(UGG)H 72 nt17.95■□□□□ 0.46
YDR341CQ05506 tP(UGG)LtP(UGG)L 72 nt17.95■□□□□ 0.46
YDR341CQ05506 SUF7tP(UGG)M 72 nt17.95■□□□□ 0.46
YDR341CQ05506 tP(UGG)N1tP(UGG)N1 72 nt17.95■□□□□ 0.46
YDR341CQ05506 tP(UGG)N2tP(UGG)N2 72 nt17.95■□□□□ 0.46
YDR341CQ05506 tP(UGG)O1tP(UGG)O1 72 nt17.95■□□□□ 0.46
YDR341CQ05506 SUF11tP(UGG)O2 72 nt17.95■□□□□ 0.46
YDR341CQ05506 RPP1BYDL130W 321 nt17.89■□□□□ 0.45
YDR341CQ05506 CCC1YLR220W 969 nt17.78■□□□□ 0.44
YDR341CQ05506 YBR190WYBR190W 312 nt17.5■□□□□ 0.39
YDR341CQ05506 ATS1YAL020C 1002 nt17.17■□□□□ 0.34
YDR341CQ05506 RTC3YHR087W 336 nt17.13■□□□□ 0.33
YDR341CQ05506 RVS167YDR388W 1449 nt17.12■□□□□ 0.33
YDR341CQ05506 PET122YER153C 765 nt17.1■□□□□ 0.33
YDR341CQ05506 SCJ1YMR214W 1134 nt17.06■□□□□ 0.32
YDR341CQ05506 tP(UGG)O3tP(UGG)O3 72 nt17■□□□□ 0.31
YDR341CQ05506 SCR1SCR1 522 nt16.91■□□□□ 0.3
YDR341CQ05506 RRN5YLR141W 1092 nt16.62■□□□□ 0.25
YDR341CQ05506 SHR5YOL110W 714 nt16.54■□□□□ 0.24
YDR341CQ05506 YDJ1YNL064C 1230 nt16.44■□□□□ 0.22
YDR341CQ05506 YER088W-BYER088W-B 147 nt16.29■□□□□ 0.2
YDR341CQ05506 RSB1YOR049C 1065 nt16.28■□□□□ 0.2
YDR341CQ05506 GAR1YHR089C 618 nt16.08■□□□□ 0.16
YDR341CQ05506 DEP1YAL013W 1218 nt16.07■□□□□ 0.16
YDR341CQ05506 URN1YPR152C 1398 nt16.05■□□□□ 0.16
YDR341CQ05506 PST2YDR032C 597 nt15.9■□□□□ 0.14
YDR341CQ05506 PUT4YOR348C 1884 nt15.85■□□□□ 0.13
YDR341CQ05506 RPN10YHR200W 807 nt15.81■□□□□ 0.12
YDR341CQ05506 YNL208WYNL208W 600 nt15.81■□□□□ 0.12
YDR341CQ05506 OPI9YLR338W 858 nt15.8■□□□□ 0.12
YDR341CQ05506 SAH1YER043C 1350 nt15.7■□□□□ 0.1
YDR341CQ05506 ARE1YCR048W 1833 nt15.59■□□□□ 0.09
YDR341CQ05506 TIR1YER011W 765 nt15.53■□□□□ 0.08
YDR341CQ05506 YHR049C-AYHR049C-A 297 nt15.39■□□□□ 0.05
YDR341CQ05506 POA1YBR022W 534 nt15.38■□□□□ 0.05
YDR341CQ05506 PUN1YLR414C 792 nt15.34■□□□□ 0.05
YDR341CQ05506 SSA1YAL005C 1929 nt15.33■□□□□ 0.05
YDR341CQ05506 YJR018WYJR018W 363 nt15.31■□□□□ 0.04
YDR341CQ05506 YKL097CYKL097C 411 nt15.28■□□□□ 0.04
YDR341CQ05506 SHU1YHL006C 453 nt15.24■□□□□ 0.03
YDR341CQ05506 PTC2YER089C 1395 nt15.15■□□□□ 0.02
YDR341CQ05506 SSA3YBL075C 1950 nt15.13■□□□□ 0.01
YDR341CQ05506 SRB2YHR041C 633 nt15.12■□□□□ 0.01
YDR341CQ05506 YJR120WYJR120W 351 nt15.1■□□□□ 0.01
YDR341CQ05506 BUD23YCR047C 828 nt15.03■□□□□ -0
YDR341CQ05506 BSC6YOL137W 1494 nt15.02■□□□□ -0
YDR341CQ05506 RPP2BYDR382W 333 nt15.01□□□□□ -0.01
YDR341CQ05506 YAL037C-BYAL037C-B 975 nt15□□□□□ -0.01
YDR341CQ05506 NAB2YGL122C 1578 nt14.93□□□□□ -0.02
YDR341CQ05506 WWM1YFL010C 636 nt14.86□□□□□ -0.03
YDR341CQ05506 YGR021WYGR021W 873 nt14.78□□□□□ -0.04
YDR341CQ05506 INM2YDR287W 879 nt14.76□□□□□ -0.05
YDR341CQ05506 DAL1YIR027C 1383 nt14.75□□□□□ -0.05
YDR341CQ05506 FIS1YIL065C 468 nt14.74□□□□□ -0.05
YDR341CQ05506 HOM6YJR139C 1080 nt14.74□□□□□ -0.05
YDR341CQ05506 FPR4YLR449W 1179 nt14.74□□□□□ -0.05
YDR341CQ05506 BDH2YAL061W 1254 nt14.72□□□□□ -0.05
YDR341CQ05506 MNP1YGL068W 585 nt14.68□□□□□ -0.06
YDR341CQ05506 YOR139CYOR139C 393 nt14.68□□□□□ -0.06
YDR341CQ05506 YBL100CYBL100C 315 nt14.63□□□□□ -0.07
YDR341CQ05506 PHO4YFR034C 939 nt14.62□□□□□ -0.07
YDR341CQ05506 YFL021C-AYFL021C-A 855 nt14.61□□□□□ -0.07
YDR341CQ05506 LSM3YLR438C-A 270 nt14.54□□□□□ -0.08
YDR341CQ05506 NPL3YDR432W 1245 nt14.53□□□□□ -0.08
YDR341CQ05506 RKM5YLR137W 1104 nt14.52□□□□□ -0.09
YDR341CQ05506 FUN26YAL022C 1554 nt14.47□□□□□ -0.09
YDR341CQ05506 TRM9YML014W 840 nt14.44□□□□□ -0.1
YDR341CQ05506 YOL037CYOL037C 354 nt14.44□□□□□ -0.1
YDR341CQ05506 YPS1YLR120C 1710 nt14.3□□□□□ -0.12
YDR341CQ05506 CCT6YDR188W 1641 nt14.29□□□□□ -0.12
YDR341CQ05506 SPT5YML010W 3192 nt14.24□□□□□ -0.13
YDR341CQ05506 ALF1YNL148C 765 nt14.24□□□□□ -0.13
YDR341CQ05506 YDR095CYDR095C 411 nt14.23□□□□□ -0.13
YDR341CQ05506 SUF2tP(AGG)C 72 nt14.15□□□□□ -0.14
YDR341CQ05506 SUF10tP(AGG)N 72 nt14.15□□□□□ -0.14
YDR341CQ05506 YHR165W-AYHR165W-A 312 nt14.15□□□□□ -0.14
YDR341CQ05506 YLR281CYLR281C 468 nt14.12□□□□□ -0.15
YDR341CQ05506 tM(CAU)CtM(CAU)C 72 nt14.11□□□□□ -0.15
YDR341CQ05506 IMT4tM(CAU)E 72 nt14.11□□□□□ -0.15
YDR341CQ05506 IMT3tM(CAU)J3 72 nt14.11□□□□□ -0.15
YDR341CQ05506 IMT1tM(CAU)O1 72 nt14.11□□□□□ -0.15
YDR341CQ05506 IMT2tM(CAU)P 72 nt14.11□□□□□ -0.15
YDR341CQ05506 MEP2YNL142W 1500 nt14.09□□□□□ -0.15
YDR341CQ05506 WHI5YOR083W 888 nt14.07□□□□□ -0.16
YDR341CQ05506 SIS1YNL007C 1059 nt14.03□□□□□ -0.16
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms