RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C UTP15Q04305 513 aaKnown RBP3.11□□□□□ -1.91
USB1YLR132C RRG8Q06109 277 aa3.11□□□□□ -1.91
USB1YLR132C VAC14Q06708 880 aa3.11□□□□□ -1.91
USB1YLR132C SGT2Q12118 346 aaKnown RBP3.11□□□□□ -1.91
USB1YLR132C UTP23Q12339 254 aaKnown RBP3.11□□□□□ -1.91
USB1YLR132C TRA1P38811 3744 aa3.11□□□□□ -1.91
USB1YLR132C CKA2P19454 339 aa3.1□□□□□ -1.91
USB1YLR132C INO2P26798 304 aa3.1□□□□□ -1.91
USB1YLR132C RPC25P35718 212 aa3.1□□□□□ -1.91
USB1YLR132C MRPL40P36534 297 aa3.1□□□□□ -1.91
USB1YLR132C ATG12P38316 186 aa3.1□□□□□ -1.91
USB1YLR132C TDA11P38854 504 aa3.1□□□□□ -1.91
USB1YLR132C PMT4P46971 762 aa3.1□□□□□ -1.91
USB1YLR132C COQ5P49017 307 aa3.1□□□□□ -1.91
USB1YLR132C KEL2P50090 882 aa3.1□□□□□ -1.91
USB1YLR132C NUP84P52891 726 aa3.1□□□□□ -1.91
USB1YLR132C OKP1P53298 406 aa3.1□□□□□ -1.91
USB1YLR132C SNX41Q04053 625 aa3.1□□□□□ -1.91
USB1YLR132C APC4Q04601 652 aa3.1□□□□□ -1.91
USB1YLR132C PBP4Q07362 185 aaKnown RBP3.1□□□□□ -1.91
USB1YLR132C YOL029CQ08187 201 aa3.1□□□□□ -1.91
USB1YLR132C SIA1Q12212 622 aa3.1□□□□□ -1.91
USB1YLR132C YBL111CQ3E7Y5 667 aa3.1□□□□□ -1.91
USB1YLR132C SPS100P13130 326 aa3.09□□□□□ -1.91
USB1YLR132C TIP20P33891 701 aa3.09□□□□□ -1.91
USB1YLR132C KDX1P36005 433 aa3.09□□□□□ -1.91
USB1YLR132C SWD2P36104 329 aaPredicted RBP3.09□□□□□ -1.91
USB1YLR132C AVT2P39981 480 aa3.09□□□□□ -1.91
USB1YLR132C SHQ1P40486 507 aaPredicted RBP3.09□□□□□ -1.91
USB1YLR132C YIL054WP40524 105 aa3.09□□□□□ -1.91
USB1YLR132C SWC4P53201 476 aa3.09□□□□□ -1.91
USB1YLR132C EGD1Q02642 157 aaKnown RBP3.09□□□□□ -1.91
USB1YLR132C SCS7Q03529 384 aa3.09□□□□□ -1.91
USB1YLR132C MRX8Q05473 314 aa3.09□□□□□ -1.91
USB1YLR132C RRP42Q12277 265 aaPredicted RBP3.09□□□□□ -1.91
USB1YLR132C TFC7Q12415 435 aa3.09□□□□□ -1.91
USB1YLR132C YIL046W-AQ3E7Z4 54 aa3.09□□□□□ -1.91
USB1YLR132C PRP8P33334 2413 aaKnown RBP3.08□□□□□ -1.92
USB1YLR132C YBR056W-AI2HB52 66 aa3.08□□□□□ -1.92
USB1YLR132C RPL16BP26785 198 aaKnown RBP3.08□□□□□ -1.92
USB1YLR132C YKL187CP34231 750 aa3.08□□□□□ -1.92
USB1YLR132C YKL162CP36052 402 aa3.08□□□□□ -1.92
USB1YLR132C DTR1P38125 572 aa3.08□□□□□ -1.92
USB1YLR132C RFT1P38206 574 aaPredicted RBP3.08□□□□□ -1.92
USB1YLR132C CDC40P40968 455 aaPredicted RBP3.08□□□□□ -1.92
USB1YLR132C MIC19P43594 170 aa3.08□□□□□ -1.92
USB1YLR132C YGR067CP53243 804 aa3.08□□□□□ -1.92
USB1YLR132C VIK1Q12045 647 aa3.08□□□□□ -1.92
USB1YLR132C RAX2Q12465 1220 aa3.08□□□□□ -1.92
USB1YLR132C YAL067W-AQ8TGK6 75 aa3.08□□□□□ -1.92
USB1YLR132C POL2P21951 2222 aaKnown RBP3.08□□□□□ -1.92
USB1YLR132C SAL1D6W196 494 aa3.07□□□□□ -1.92
USB1YLR132C RAD3P06839 778 aa3.07□□□□□ -1.92
USB1YLR132C GAL7P08431 366 aa3.07□□□□□ -1.92
USB1YLR132C UGA1P17649 471 aa3.07□□□□□ -1.92
USB1YLR132C MRPL20P22354 195 aaPredicted RBP3.07□□□□□ -1.92
USB1YLR132C IFM1P25038 676 aa3.07□□□□□ -1.92
USB1YLR132C RPS0AP32905 252 aaKnown RBP3.07□□□□□ -1.92
USB1YLR132C RRF1P38771 230 aa3.07□□□□□ -1.92
USB1YLR132C DSE1P40077 573 aa3.07□□□□□ -1.92
USB1YLR132C TIF34P40217 347 aaKnown RBP3.07□□□□□ -1.92
USB1YLR132C LOC1P43586 204 aaPredicted RBP3.07□□□□□ -1.92
USB1YLR132C HSH155P49955 971 aaKnown RBP3.07□□□□□ -1.92
USB1YLR132C SDS23P53172 527 aa3.07□□□□□ -1.92
USB1YLR132C FMP48P53233 369 aa3.07□□□□□ -1.92
USB1YLR132C TPC1P53257 314 aa3.07□□□□□ -1.92
USB1YLR132C INP1Q03694 420 aa3.07□□□□□ -1.92
USB1YLR132C YLR413WQ06689 675 aa3.07□□□□□ -1.92
USB1YLR132C YPL278CQ08990 100 aa3.07□□□□□ -1.92
USB1YLR132C TIR4Q12218 487 aaPredicted RBP3.07□□□□□ -1.92
USB1YLR132C ECM13P38195 257 aa3.06□□□□□ -1.92
USB1YLR132C SOP4P39543 234 aaPredicted RBP3.06□□□□□ -1.92
USB1YLR132C UFE1P41834 346 aa3.06□□□□□ -1.92
USB1YLR132C RTC4P53850 401 aa3.06□□□□□ -1.92
USB1YLR132C SPO19Q03029 223 aa3.06□□□□□ -1.92
USB1YLR132C INP2Q03824 705 aa3.06□□□□□ -1.92
USB1YLR132C BCP1Q06338 283 aa3.06□□□□□ -1.92
USB1YLR132C BI3Q9ZZW7 517 aa3.06□□□□□ -1.92
USB1YLR132C RPC40P07703 335 aaKnown RBP3.05□□□□□ -1.92
USB1YLR132C CSM1P25651 190 aa3.05□□□□□ -1.92
USB1YLR132C SGE1P33335 543 aa3.05□□□□□ -1.92
USB1YLR132C YKL063CP35725 167 aa3.05□□□□□ -1.92
USB1YLR132C RCK1P38622 512 aa3.05□□□□□ -1.92
USB1YLR132C PNC1P53184 216 aaKnown RBP3.05□□□□□ -1.92
USB1YLR132C CLP1Q08685 445 aaPredicted RBP3.05□□□□□ -1.92
USB1YLR132C APC9Q12107 265 aa3.05□□□□□ -1.92
USB1YLR132C LAG2Q92325 660 aa3.05□□□□□ -1.92
USB1YLR132C TDH3P00359 332 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
USB1YLR132C FUS3P16892 353 aaKnown RBP3.04□□□□□ -1.92
USB1YLR132C MCH2P36032 473 aa3.04□□□□□ -1.92
USB1YLR132C YIR035CP40579 254 aa3.04□□□□□ -1.92
USB1YLR132C NBP1P52919 319 aaPredicted RBP3.04□□□□□ -1.92
USB1YLR132C YNR066CP53752 436 aa3.04□□□□□ -1.92
USB1YLR132C YNL260CP53846 198 aa3.04□□□□□ -1.92
USB1YLR132C SWS2P53937 143 aa3.04□□□□□ -1.92
USB1YLR132C MZM1Q03429 123 aaPredicted RBP3.04□□□□□ -1.92
USB1YLR132C YMR111CQ04461 462 aaPredicted RBP3.04□□□□□ -1.92
USB1YLR132C ERV41Q04651 352 aa3.04□□□□□ -1.92
USB1YLR132C PIN3Q06449 215 aa3.04□□□□□ -1.92
USB1YLR132C GPN3Q06543 272 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms