Protein–RNA interactions for Protein: Q06543

GPN3, GPN-loop GTPase 3, yeastyeast

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GPN3Q06543 NSR1YGR159C 1245 nt18.07■□□□□ 0.48
GPN3Q06543 YML009W-BYML009W-B 477 nt17.67■□□□□ 0.42
GPN3Q06543 NOP1YDL014W 984 nt17.06■□□□□ 0.32
GPN3Q06543 MDJ1YFL016C 1536 nt16.41■□□□□ 0.22
GPN3Q06543 YKL036CYKL036C 393 nt15.24■□□□□ 0.03
GPN3Q06543 YJL027CYJL027C 417 nt15.17■□□□□ 0.02
GPN3Q06543 SRX1YKL086W 384 nt14.87□□□□□ -0.03
GPN3Q06543 Q0297Q0297 156 nt14.75□□□□□ -0.05
GPN3Q06543 DBP2YNL112W 1641 nt14.33□□□□□ -0.12
GPN3Q06543 YBR190WYBR190W 312 nt14.21□□□□□ -0.13
GPN3Q06543 YCR051WYCR051W 669 nt14.05□□□□□ -0.16
GPN3Q06543 RTC3YHR087W 336 nt13.84□□□□□ -0.19
GPN3Q06543 TRN1tP(UGG)A 72 nt13.71□□□□□ -0.21
GPN3Q06543 SUF9tP(UGG)F 72 nt13.71□□□□□ -0.21
GPN3Q06543 SUF8tP(UGG)H 72 nt13.71□□□□□ -0.21
GPN3Q06543 tP(UGG)LtP(UGG)L 72 nt13.71□□□□□ -0.21
GPN3Q06543 SUF7tP(UGG)M 72 nt13.71□□□□□ -0.21
GPN3Q06543 tP(UGG)N1tP(UGG)N1 72 nt13.71□□□□□ -0.21
GPN3Q06543 tP(UGG)N2tP(UGG)N2 72 nt13.71□□□□□ -0.21
GPN3Q06543 tP(UGG)O1tP(UGG)O1 72 nt13.71□□□□□ -0.21
GPN3Q06543 SUF11tP(UGG)O2 72 nt13.71□□□□□ -0.21
GPN3Q06543 SSA3YBL075C 1950 nt13.69□□□□□ -0.22
GPN3Q06543 CCC1YLR220W 969 nt13.56□□□□□ -0.24
GPN3Q06543 SCS3YGL126W 1143 nt13.55□□□□□ -0.24
GPN3Q06543 RVS167YDR388W 1449 nt13.44□□□□□ -0.26
GPN3Q06543 PUT4YOR348C 1884 nt13.23□□□□□ -0.29
GPN3Q06543 RPP1BYDL130W 321 nt13.22□□□□□ -0.29
GPN3Q06543 YOL085CYOL085C 342 nt13.2□□□□□ -0.3
GPN3Q06543 SCJ1YMR214W 1134 nt13.16□□□□□ -0.3
GPN3Q06543 PKP1YIL042C 1185 nt13.01□□□□□ -0.33
GPN3Q06543 SHR5YOL110W 714 nt12.83□□□□□ -0.36
GPN3Q06543 ARE1YCR048W 1833 nt12.83□□□□□ -0.36
GPN3Q06543 tP(UGG)O3tP(UGG)O3 72 nt12.82□□□□□ -0.36
GPN3Q06543 POA1YBR022W 534 nt12.79□□□□□ -0.36
GPN3Q06543 URN1YPR152C 1398 nt12.76□□□□□ -0.37
GPN3Q06543 SAH1YER043C 1350 nt12.7□□□□□ -0.38
GPN3Q06543 OPI9YLR338W 858 nt12.7□□□□□ -0.38
GPN3Q06543 YHR049C-AYHR049C-A 297 nt12.66□□□□□ -0.38
GPN3Q06543 PET122YER153C 765 nt12.64□□□□□ -0.39
GPN3Q06543 BSC6YOL137W 1494 nt12.59□□□□□ -0.39
GPN3Q06543 DEP1YAL013W 1218 nt12.58□□□□□ -0.4
GPN3Q06543 RPN10YHR200W 807 nt12.51□□□□□ -0.41
GPN3Q06543 SCR1SCR1 522 nt12.45□□□□□ -0.42
GPN3Q06543 YDJ1YNL064C 1230 nt12.44□□□□□ -0.42
GPN3Q06543 YNL208WYNL208W 600 nt12.4□□□□□ -0.42
GPN3Q06543 SPT5YML010W 3192 nt12.36□□□□□ -0.43
GPN3Q06543 BUD23YCR047C 828 nt12.35□□□□□ -0.43
GPN3Q06543 PUN1YLR414C 792 nt12.35□□□□□ -0.43
GPN3Q06543 RRN5YLR141W 1092 nt12.26□□□□□ -0.45
GPN3Q06543 PTC2YER089C 1395 nt12.25□□□□□ -0.45
GPN3Q06543 GAR1YHR089C 618 nt12.2□□□□□ -0.46
GPN3Q06543 NAB2YGL122C 1578 nt12.18□□□□□ -0.46
GPN3Q06543 SSA4YER103W 1929 nt12.17□□□□□ -0.46
GPN3Q06543 YJR018WYJR018W 363 nt12.16□□□□□ -0.46
GPN3Q06543 ATS1YAL020C 1002 nt12.02□□□□□ -0.49
GPN3Q06543 YER088W-BYER088W-B 147 nt12□□□□□ -0.49
GPN3Q06543 DAL1YIR027C 1383 nt11.92□□□□□ -0.5
GPN3Q06543 MEP2YNL142W 1500 nt11.9□□□□□ -0.5
GPN3Q06543 FIS1YIL065C 468 nt11.89□□□□□ -0.51
GPN3Q06543 FPR4YLR449W 1179 nt11.85□□□□□ -0.51
GPN3Q06543 RSB1YOR049C 1065 nt11.85□□□□□ -0.51
GPN3Q06543 INM2YDR287W 879 nt11.84□□□□□ -0.51
GPN3Q06543 TIR1YER011W 765 nt11.82□□□□□ -0.52
GPN3Q06543 RPP2BYDR382W 333 nt11.81□□□□□ -0.52
GPN3Q06543 YJR120WYJR120W 351 nt11.79□□□□□ -0.52
GPN3Q06543 PHO4YFR034C 939 nt11.78□□□□□ -0.52
GPN3Q06543 SSA1YAL005C 1929 nt11.75□□□□□ -0.53
GPN3Q06543 BDF1YLR399C 2061 nt11.74□□□□□ -0.53
GPN3Q06543 YPS1YLR120C 1710 nt11.73□□□□□ -0.53
GPN3Q06543 YHR165W-AYHR165W-A 312 nt11.65□□□□□ -0.54
GPN3Q06543 DCW1YKL046C 1350 nt11.65□□□□□ -0.55
GPN3Q06543 PAC11YDR488C 1602 nt11.6□□□□□ -0.55
GPN3Q06543 YBL100CYBL100C 315 nt11.59□□□□□ -0.55
GPN3Q06543 TAT1YBR069C 1860 nt11.58□□□□□ -0.56
GPN3Q06543 YDR095CYDR095C 411 nt11.58□□□□□ -0.56
GPN3Q06543 NVJ2YPR091C 2313 nt11.57□□□□□ -0.56
GPN3Q06543 YMR090WYMR090W 684 nt11.56□□□□□ -0.56
GPN3Q06543 EMI2YDR516C 1503 nt11.53□□□□□ -0.56
GPN3Q06543 YBR220CYBR220C 1683 nt11.47□□□□□ -0.57
GPN3Q06543 BDH2YAL061W 1254 nt11.47□□□□□ -0.57
GPN3Q06543 Q0182Q0182 405 nt11.45□□□□□ -0.58
GPN3Q06543 FUN26YAL022C 1554 nt11.43□□□□□ -0.58
GPN3Q06543 YDL221WYDL221W 552 nt11.4□□□□□ -0.58
GPN3Q06543 ALF1YNL148C 765 nt11.4□□□□□ -0.58
GPN3Q06543 SRB2YHR041C 633 nt11.39□□□□□ -0.59
GPN3Q06543 RPP2AYOL039W 321 nt11.38□□□□□ -0.59
GPN3Q06543 TRM9YML014W 840 nt11.37□□□□□ -0.59
GPN3Q06543 SDH1YKL148C 1923 nt11.35□□□□□ -0.59
GPN3Q06543 PTP1YDL230W 1008 nt11.35□□□□□ -0.59
GPN3Q06543 CAC2YML102W 1407 nt11.34□□□□□ -0.59
GPN3Q06543 FPS1YLL043W 2010 nt11.33□□□□□ -0.6
GPN3Q06543 LSM3YLR438C-A 270 nt11.27□□□□□ -0.61
GPN3Q06543 CCT6YDR188W 1641 nt11.24□□□□□ -0.61
GPN3Q06543 SIS1YNL007C 1059 nt11.23□□□□□ -0.61
GPN3Q06543 PST2YDR032C 597 nt11.22□□□□□ -0.61
GPN3Q06543 SCC4YER147C 1875 nt11.22□□□□□ -0.61
GPN3Q06543 SUF2tP(AGG)C 72 nt11.22□□□□□ -0.61
GPN3Q06543 SUF10tP(AGG)N 72 nt11.22□□□□□ -0.61
GPN3Q06543 WWM1YFL010C 636 nt11.19□□□□□ -0.62
GPN3Q06543 SEC11YIR022W 504 nt11.19□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms